| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2684 |
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| Symbol | |
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| ID | 4458983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3318811 |
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| End bp | 3319641 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703455 |
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| Product | Fe-S cluster assembly protein NifU |
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| Protein accession | YP_846797 |
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| Protein GI | 116750110 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0694] Thioredoxin-like proteins and domains
[COG0822] NifU homolog involved in Fe-S cluster formation
[COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0380338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGAAT ACACGGATAA GGTGAAGGAG CATTTCCTGA ACCCGCGCAA TGTGGGCGAA
ATCGAAGAAC CGGACGGGGT TGCCGAGGTT GGATCCATCG CCTGCGGCGA TGCGCTGAAG
TTCACCTTCA AGCTGGATGA AAACGGGAGG ATCAAGGAGG CCAAGTTCAA GACCTTCGGC
TGTGCGAGTG CCATCGCATC CGCATCGGCG CTGACCGAAA TCGTCAAGGG CATGACCGTC
GAAGAGGCCT CCAAGGTGAC GAACCAGGAT ATTGCCAGGT TCCTGGGAGG CCTGCCCGAG
GAAAAAATGC ACTGCTCGGT GATGGGCCGA GAGGCTTTGG ACAAAGCCAT CGCGTACTAT
CGCGGCGACA CCGGGAAAGA GGTCGAGGAT AAGGTGGTTT GTGAATGTTT CGGGGTCACT
GAGAAGGAGA TCGAGAAGGC CATCCGTGAG AACGCCCTCA CTACCCTGGA AGAAGTCACG
AACTACACCA AAGCCGGGGG AGGCTGCGGC AACTGCCACC CCGCCATCCA GGAAATCATC
GACAGGGTCT TGGGGGATGT GCACGCCAAG CCCGTTCCCA GGCCGAAGAT GTCGAATCTT
CGCAAGATCC GGTTGATCGA GGAGACCATC GATCAGGAGA TCCGGCCGTC CCTCAAGCAG
GACGGTGGGG ACATCGAGCT GGTGGACGTG GTGGGAAACC GGGTCCTGGT AGCCACGAGG
GGTGCCTGCG CGTCCTGCCA GGCCGCCAAC CGGACGCTGA AAAATTTCGT CGAGGTGAAG
CTCCGTGAGC TGGTCCTGCC CGAGCTGGTG GTTGAGGAGG TTTCCCAGTG A
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| Protein sequence | MWEYTDKVKE HFLNPRNVGE IEEPDGVAEV GSIACGDALK FTFKLDENGR IKEAKFKTFG
CASAIASASA LTEIVKGMTV EEASKVTNQD IARFLGGLPE EKMHCSVMGR EALDKAIAYY
RGDTGKEVED KVVCECFGVT EKEIEKAIRE NALTTLEEVT NYTKAGGGCG NCHPAIQEII
DRVLGDVHAK PVPRPKMSNL RKIRLIEETI DQEIRPSLKQ DGGDIELVDV VGNRVLVATR
GACASCQAAN RTLKNFVEVK LRELVLPELV VEEVSQ
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