| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2683 |
|---|
| Symbol | |
|---|
| ID | 4458982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3317633 |
|---|
| End bp | 3318814 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639703454 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_846796 |
|---|
| Protein GI | 116750109 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0397114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACAA TATATCTCGA CAACAACGCA ACCACCCGGG TCGCGCCGGA AGTGCTCGAA
GAGATGCTTC CCTATTTCAG CCAGCTCTAC GGCAACCCGT CGAGCATGCA TTCCTTCGGC
GGCCAGGTGG GAAGGAAGCT GAGGGAAGCC CACGAAAAAA TGGCGGCTCT CCTGGGTGCC
TCGCCCGATG AGATCATTTT CACCAGTTGC GGCACCGAAA GCGACAACGC CGCGGTTCGA
GCCGCTCTCC ACTCCAACCC GGACAAGCGG CACATCGTTA CGAGCCGGGT CGAACACCCT
GCAATCCGCG CGCTTTGCGC GCACCTGGCC ACCAGGGGGT ACCGGGTGAC GGAGCTGCCC
GTCGACGCGG AGGGGCGATT GGACCTTGAG CAGTACCGAA AAGCGCTGAC GGCCGATACG
GCGGTCGTGA GCCTGATGTG GGCGAACAAT GAAACGGGGG TCGTGTTCCC CGTGGAACAG
GCTGCGGAGA TAGCCGGGGA AAAGGGAATC ATCTTTCACA CCGATGCCGT CCAGGCCGTC
GGCAAAATCC CCATCGACCT CGGCAAGACC GCCATCAACA TGCTCTCGCT GTCCGGTCAC
AAGCTGCATG CCCCCAAGGG TGTCGGGGTG CTCTACGTTC GCAGGGGAAC CAAGTTTTCC
CCGTTCATGA TCGGCGGACA CCAGGAAAAG GGGCGTCGCG GCGGGACGGA GAACACGCCG
GGCATCATCG GCCTGGGCAA GGCGGCCGAG CTGGCAGCCC GCTACATGGA GACCGAAAAC
ACGGTGGTGA AGAACCTGCG GGACAGACTG GAGAACGCGC TGCTTGCCCG CATTCCCAAC
AGCAGAGTAA ACGGAGACCG CGTGAACCGG CTTCCGAATA CGACCAACAT CAGCTTCGAA
TTTGTTGAAG GCGAAGGCAT CCTGCTGATG ATGGACGAAT TCGGAATTTG CGCATCCTCG
GGTTCGGCCT GCACTTCCGG ATCGCTGCAA CCTTCCCACG TGCTGCGCGC GATGGGCGTT
CCCTTCACCA TGGCCCACGG GTCCATACGG TTCAGCCTGA GTGTCTACAA TACGGATGAA
GAGATCGATC TGGTGGTCGA GAAACTGCCT GCGATCATCG AAACGTTGCG CGCCATGTCG
CCTTATTGGA AGCCGGGCGA GGGTGTTTGC GCCAGGAGTT AG
|
|---|
| Protein sequence | MKTIYLDNNA TTRVAPEVLE EMLPYFSQLY GNPSSMHSFG GQVGRKLREA HEKMAALLGA
SPDEIIFTSC GTESDNAAVR AALHSNPDKR HIVTSRVEHP AIRALCAHLA TRGYRVTELP
VDAEGRLDLE QYRKALTADT AVVSLMWANN ETGVVFPVEQ AAEIAGEKGI IFHTDAVQAV
GKIPIDLGKT AINMLSLSGH KLHAPKGVGV LYVRRGTKFS PFMIGGHQEK GRRGGTENTP
GIIGLGKAAE LAARYMETEN TVVKNLRDRL ENALLARIPN SRVNGDRVNR LPNTTNISFE
FVEGEGILLM MDEFGICASS GSACTSGSLQ PSHVLRAMGV PFTMAHGSIR FSLSVYNTDE
EIDLVVEKLP AIIETLRAMS PYWKPGEGVC ARS
|
|---|
| |