Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2677 |
Symbol | |
ID | 4459011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3311026 |
End bp | 3312966 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703448 |
Product | helicase c2 |
Protein accession | YP_846790 |
Protein GI | 116750103 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.663694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.183253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGTT ATTTTGGTCC TGACGGCCTT CTGGCCGAGA ATGTCACGCA CTTCGAATTT CGCCCTTCCC AGCTGGAAAT GGCAGAGGCG GTTCTCGAGG CGCTGGGTGC CCGTTCGCCG CTTGTGGTCG AAGCGGGAAC GGGCACGGGG AAGACCTGGG CCTACCTGGT TCCCGCCATC CTCAGCGGAA AGCGCACAGT GGTTTCCACC GGTACGAAGA CCCTCCAGGA CCAAATCCTG GACCAGGACA TACCGTTCCT GAAACGCACG GTGTATCCCA AGCTTCGAGC CGTCTGCCTG AAGGGCCGCG GGAATTATCT GTGCCATCGG CGTTTCAAGG ATTTCTCCTA TCAACCCACA CTCTGGAACA AGGACGAAGC CAAGCTCTGG AGCCGATTTC AGAAGTGGGC CACAAGGACC CGTACCGGGG ATCGGGCGGA GATTTCCTGG CTCCCGGACC AGTTTCACAC CTGGAATGAA GTCTGCTCCG CCGGCGAACA CTGCCTCGGC CAACAGTGCT CCGATGTGCA GCGGTGCTTT GTGACGCGGC TGCGCGCCGA AGCCGCACAG GCGCACCTGG TTGTCGTCAA CCATCACCTT TTCTTCGCTG ACCTCGCCTT GAGAGACAAG GCGGACACGG GGGTCCTTCC GGAGTACGAC GCGGTCATAT TCGACGAGGC CCACCAGCTC GAAGACGTCA TGGGACAGTA TTTCGGGATC CAGTTCAACA GTTACGGACT TATGGAACTG ACCCGCGTCC TGCAGCGCGA ATTCAAGAAG GAAACCGGGG CGTCACACCG CTTCCACGAT GCGCGGAGAA TCGTCCAGCA GCTGGAGGTG CTGAATCGCC TTCTGCATCG TCACCTGTTC GAAGTCCGCG GGTCCCAGGG ACGGTTTCCG CTCGACATGA GCAGAATGGG CAAGAACTTC GTGCAATCCT GCAATCAGCT CATCCATGCG CTCGATGAGC TGGCACCCAT GATCGCGCCG GCCGAAGACC TTCCCCTGTC CTTCGAAGCC TACCATCGGA GGGCTTCCGA CCTGTCCGGG GCCGTACGAA TGCTCCTCGC GCAGGAAGAC GAATCCCTGG TTTACTGGTA CGAAGTCGGC CAAAATGCTC TGTTCCTGAA TGCGACCCCC ATCGAGGTGT GTTCCATCTT CCGCCGGCGG GTGCTCACAC CCAACCGCCC CGTGATCCTT ACCTCGGCAA CCCTGTCCGT TGCCGGTTCG TTCGATTTTG TGCGTCAGTC CCTGGGAATC GCGCCGGACA GCAAATCGAT CCGGCTGCCT TCTCCCTTCG CCTACGCCGA GCAGACCATG CTCTATATCC CGCGACGGTT TCCGGCCCCC AATGAACACG ACTTCTGCCG CCAAATCGCG GAGCAGTCCG TGGAAATCCT GCTCAAGACC CGGGGCAGGG CGCTTTTCCT TTTCACGAGC TACCGAAACA TGAACGAAGT CCATCAGCTG TTGCGTGACC GTCTCCCGTA CCCGATCCTG GTGCAGGGGC AAAAACCGAA GCGCGCTCTG CTGGCTGAAT TCAAGGAGAG CATCGGTTCC GTGCTGTTCG CGACCAGCTC GTTCCGGCAG GGAATCGATG TTCCGGGGGA AGCTCTCAGC TGCCTGCTCA TCGACAAGCT CCCCTTCGAA GTCCCCGACG ACCCTCTTGC CGCTGCCCGT ATGGATTTCA TCACCCGACA GGGAAAAAGC TCGTTTTTCG GCTACCAGGT GCCTCGCGCG GTCATTCAAC TCAAGCAAGG CGTCGGTCGC CTGATTCGCT CATCCAGCGA CCGCGGCCTC ATCGTCATTT TCGATGTCCG TCTCCTGCAG AAAAACTACG GTCAAATATT CCTGAAGAGC CTTCCCCCCT GCCGGCTCGT TCACCAACTG GACGCCATCG ACGAGTTCCA ATGGGGTCCA TCCGGCATTT CCTCTTCGTG A
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Protein sequence | MRRYFGPDGL LAENVTHFEF RPSQLEMAEA VLEALGARSP LVVEAGTGTG KTWAYLVPAI LSGKRTVVST GTKTLQDQIL DQDIPFLKRT VYPKLRAVCL KGRGNYLCHR RFKDFSYQPT LWNKDEAKLW SRFQKWATRT RTGDRAEISW LPDQFHTWNE VCSAGEHCLG QQCSDVQRCF VTRLRAEAAQ AHLVVVNHHL FFADLALRDK ADTGVLPEYD AVIFDEAHQL EDVMGQYFGI QFNSYGLMEL TRVLQREFKK ETGASHRFHD ARRIVQQLEV LNRLLHRHLF EVRGSQGRFP LDMSRMGKNF VQSCNQLIHA LDELAPMIAP AEDLPLSFEA YHRRASDLSG AVRMLLAQED ESLVYWYEVG QNALFLNATP IEVCSIFRRR VLTPNRPVIL TSATLSVAGS FDFVRQSLGI APDSKSIRLP SPFAYAEQTM LYIPRRFPAP NEHDFCRQIA EQSVEILLKT RGRALFLFTS YRNMNEVHQL LRDRLPYPIL VQGQKPKRAL LAEFKESIGS VLFATSSFRQ GIDVPGEALS CLLIDKLPFE VPDDPLAAAR MDFITRQGKS SFFGYQVPRA VIQLKQGVGR LIRSSSDRGL IVIFDVRLLQ KNYGQIFLKS LPPCRLVHQL DAIDEFQWGP SGISSS
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