| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2676 |
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| Symbol | |
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| ID | 4459010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3308310 |
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| End bp | 3310697 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639703447 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_846789 |
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| Protein GI | 116750102 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.21019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC CGGGTCCTTC AAAACGAGCA CCCAAACGCA AAACGTTTCG GTGGTTTGTT
CTTGCCGTTG CTTCCGTGCT TTTTTGCCTG GTTCTGATTG TCGGGGTCGG ATTGTTCGCA
TTTTACATCC AGTTGGACCG TTCGCTTCCC AGTACCCAGT CTCTCAAGAA CTATCACCCG
CCCCTGGTTT CCAGTGTGTA CTCCGCCGAC GGTGAGCTTA TCGGAGAGTT CTTCATCGAG
CGACGCTACC TCATACCCCT GAAGGATGTT CCGGCCATGA TGATCAAAGC CTTCCTGGCG
GCTGAGGACG TCAGGTTCTA CGAACACGGC GGGGTGGACT TCTTCGGGAT CCTCCGGGCC
TCGTTCAAGA ACCTCCAGGC CGGAGAAATC GTGCAGGGCG GGAGCACCAT CACCCAGCAG
GTGGTTAAAT CGCTTCTCCT GACCCCGGAA AAGACCTTGG CCAGGAAGAT GAAGGAAGCG
CTGCTTGCCT ACCGGATCGA TCACACCCTG AGCAAGGATG AAATTCTATA CCTCTATCTC
AATCAAATCT ATTTCGGCTC GGGCGCCTAC GGAGTGGAGG CGGCCGCGCG GACCTATTTC
AACAAGCACG TGCAGGATCT GACTCTGCCC GAAGCCGCGC TGCTTGCCGG CCTGCCCAAA
GCTCCGAGCC GCTTTTCGCC TTTTCAGCAC CCTGCAGTCG CCAGGGAACG CCAGGGCTAC
GTGCTGCAGC GCATGGCGGA GGTGGGATTC ATTACGCCCG AGGAAGCTCA GAAGGCCATG
GCAAAACCCC TCCAATTGGC AAAGCCAAAG CACTGGACGC TGAAGGAGCT CGATTCCTTC
ACCGAGGAGG TCCGCAGGCA GGTGGAGGCC CGCTACGGCC GTGATATGCT CTACAAGGAA
GGCCTGACCA TCCACACGAC GCTCGATTCA AAAGGGCAGA AGATTGCCCG GAAAGCTCTG
GATCAGGGAC TTCGCGAGCT CGACAAACGC CACAAGAGCT ACCGCGGCGT CCACGCCAAC
GTTCCCCGGG AGGACTGGCC GGGCGCTCTG AGGGTTCTCG CGCAGAGCAA TGGCGAACTG
ACCCAGGGGA AAGTGGTTGC GGCCATAGTG AGGAGTTTCG ACGAGAGAAG CCGGGCCTGC
CAGATCATGT TCGGCAAGGG CGAGGGAAAA CTGCCCGCCT CCGGATATGA ATGGACGAGA
GTGTCCGCCA AGCGCGCCTC AAAGATGTTT CGCGCCGGGG ACATCATCCG GGTGCGGCTC
GACAAGCCCC TGGAGGACGG CTCCTGGATG ACCGTTCTCG AACAGGATCC CGGCATGGAA
GGGGCTTTGA TGGCCATAGC GCCCGACACC GGCCGGGTGC TGGTCATGGT CGGGGGGCGG
AACTTCGAGA AAAGCCAGTT CAATCGCTGC ACCCAGGCGA TCCGTCAGCC CGGATCATCC
TTCAAGCCCA TCATTTATGC CGCGGCACTC GACAAAGGCT ATACGGAGGC CTCCATCCTC
GTCGATTCGC CGCTCGTTCT CGACGACCAC AGCCTGAGGG GACCCTGGAT ACCGTCGAAC
TACGACCGGA AATTCTGGGG GCCCATTTCG CTGAGGAAGG CTCTGGTGAA TTCGAGGAAC
GTGGTTACGG TAAAGCTGCT CGACGCCATC GGGGTGCACT ATGCCATCGA CTATGCAAGG
AAACTCGGCA TTTCCGCACC CCTGACTCCA ACCCTCGCAC TCGCGCTGGG AGCCTCCGGG
CTGACTCTTT CCGAGCTGCT CACCGCCTAT TCGCCTTTTG CCGCCCAGGG GGAACGCGTG
GAACCCTACC TCGTCGAGAA GATCTACGAC CGGCACGGCG GACTGGTCGA AGAACACCAG
GTCAACCGGC AACAGGTCAT TTCACCCCAG ACGGCCTACT TGATGACCAA TCTGCTGGAA
GGGGTGGTCC TGGAGGGCAC GGGAACGAAG GCGAAGGAAA TCGGCAGACC TGCCGCGGGA
AAAACCGGCA CCACCAATGA AATGAAGGAC GCCTGGTTTA TCGGTTTTAC ACCCACCGTG
CTCGCCGGAG TGTGGGTGGG ATACGACGAT CACAACATCT CGCTGGGAAA AGGTGAAACG
GGGGGCCGGG CCGCGTGCCC GATCTGGGTG TACTTTATGA AAGAGTACAT GATGAATCAG
CCCATCGACA CCTTCGCCAT TCCTGAAGGC ATTGTATTTG CCAAGATGAA TTCCTACACG
GGCGCGATTT CGAAATCCGA CGAACCTGGA GGGACATACG CCGCATTCGC GGGCAGTCTG
CCGACCGGGC GAAGCGGTCC CGATTCCGAG CTTTCGGAGG ATCTCGTCAC GGGCTCCGGG
TCATACACTT CTTCATCGGA ATCCTTTTTC AAGTCCGACC TCTTCTAG
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| Protein sequence | MRKPGPSKRA PKRKTFRWFV LAVASVLFCL VLIVGVGLFA FYIQLDRSLP STQSLKNYHP
PLVSSVYSAD GELIGEFFIE RRYLIPLKDV PAMMIKAFLA AEDVRFYEHG GVDFFGILRA
SFKNLQAGEI VQGGSTITQQ VVKSLLLTPE KTLARKMKEA LLAYRIDHTL SKDEILYLYL
NQIYFGSGAY GVEAAARTYF NKHVQDLTLP EAALLAGLPK APSRFSPFQH PAVARERQGY
VLQRMAEVGF ITPEEAQKAM AKPLQLAKPK HWTLKELDSF TEEVRRQVEA RYGRDMLYKE
GLTIHTTLDS KGQKIARKAL DQGLRELDKR HKSYRGVHAN VPREDWPGAL RVLAQSNGEL
TQGKVVAAIV RSFDERSRAC QIMFGKGEGK LPASGYEWTR VSAKRASKMF RAGDIIRVRL
DKPLEDGSWM TVLEQDPGME GALMAIAPDT GRVLVMVGGR NFEKSQFNRC TQAIRQPGSS
FKPIIYAAAL DKGYTEASIL VDSPLVLDDH SLRGPWIPSN YDRKFWGPIS LRKALVNSRN
VVTVKLLDAI GVHYAIDYAR KLGISAPLTP TLALALGASG LTLSELLTAY SPFAAQGERV
EPYLVEKIYD RHGGLVEEHQ VNRQQVISPQ TAYLMTNLLE GVVLEGTGTK AKEIGRPAAG
KTGTTNEMKD AWFIGFTPTV LAGVWVGYDD HNISLGKGET GGRAACPIWV YFMKEYMMNQ
PIDTFAIPEG IVFAKMNSYT GAISKSDEPG GTYAAFAGSL PTGRSGPDSE LSEDLVTGSG
SYTSSSESFF KSDLF
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