Gene Sfum_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2641 
Symbol 
ID4459045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3266597 
End bp3267184 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID639703412 
Productisochorismatase hydrolase 
Protein accessionYP_846754 
Protein GI116750067 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAGG ATTCGCAGCG TTTCGGACTC ATCATCGTCG ATATGCAAAA CGACTTCGTC 
CTGCCCGGTT CCCCCACCGC GCTCGACGGA GCCTACGCGA CCATCCCCGA AATCGTTCGG
GCGCTCGAGT TCTTCAGAGA GCGCAAGTGG CCCGTCTTTC ACGTCGTGCG CGAATACCGC
GAAGACGGCA GCGACATCGA ATCGTTCCGC TACGGGAGGT TCATGGAACA ATACAAGTGC
GGCGTTCCCG GCACCCGGGG ATGCGAGATC GTGGCCGAGT TGACCCCCCT GCCGGGCGAA
TATCGGATCG TGAAGAACCG GTTCAGCGCG TTCATGCTGA CCGAGCTGGA CTTCATGTTG
AGGAGGCTTG GCTTAGACCG CATCGCGGTC TGCGGAACGC AGTACCCGAA CTGCATTCGA
ACCACGGTGT TCGATGGAGT CGCCTACGGT TACGCAGTGA CCGTGCTGAC CGATGCGACT
TCGGCCAGGA CGCCGGAAAT CGCCGCCGCC AACATCACCG ACATGCGCAA CATCGACGTC
GAGTGCATCA CCGTGGAGGA ATTCGTGAAA GCGCAGGCGC CGCGCTAG
 
Protein sequence
MNKDSQRFGL IIVDMQNDFV LPGSPTALDG AYATIPEIVR ALEFFRERKW PVFHVVREYR 
EDGSDIESFR YGRFMEQYKC GVPGTRGCEI VAELTPLPGE YRIVKNRFSA FMLTELDFML
RRLGLDRIAV CGTQYPNCIR TTVFDGVAYG YAVTVLTDAT SARTPEIAAA NITDMRNIDV
ECITVEEFVK AQAPR