| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2629 |
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| Symbol | |
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| ID | 4459033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3246456 |
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| End bp | 3248822 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703400 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_846742 |
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| Protein GI | 116750055 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCG GCCCGGCGGC TGTGTGCATC AAGACTGCCC GAACCTCTTA TCCGTGTGAG
CAGGAATCGG GATTCCATGG GGATTTGCAG GTCCGGGCTT TCACCGTGGC ATCAAACGTT
TCGACACCGT CAGGAGCCTG CTCGAGGGCG CTGCAAACTG GGGAAGAGGC AATGACAAGT
CCGAGGAAAT CCGCGGTGAC GACACTTGGA TTGAGCATGG CCATGGCGCT GGCCTTTTTT
TCGCTGAGCG TGGCGGTGCT TCTTCTCTAC AGCGGATTGG ACGCTGTGCG TGATTTCAGA
GCCCAGGAGT CGGACATTTT CAACAAGCAA CAGCTTGCGG CACAGAATGC GGCCAAGACG
GTGAGCAACT TCATCAACGA GAACTTCAGC GTACTGGAAA CAGCGATAGG GTTGAGCCCC
TTCGACAGGA TGTCCGGCAC TGAGCAAAAG CAGGTCCTGC AGACCCTGGT CGGGCTCCGG
CCCGCCTTCA GGCACCTGGT GCTGTTCGAT GATCGAAACG AAGTCGTCGC TCAGGCCTCC
CGGCTTTCCT CGTATGCATC GAAAGCATTC ATCGACAGGC TCAAGGAGAG TCTGCCCGGA
AAGAATCCCC CGGTGGAGCG GACGATCGGT CCGGTGCATG TGAATCCCGC GACGAGCGAA
CCCATGGCGA TCATGGCTCT TCCGGTCAAA AACGTCCTGG GAGACGTCCA AGGGACTTTG
ATCGTCGAGC TCAACCTGAA ATTCATGTGG GATATCGTCG ATCGGCTGAA AGTGGGTGAG
ACCGGCTACG TCTACGTTGC CGACAGAAAG GGCAATCTGC TCGCTTTCAG TGACTCCGGC
AGGGTATTGA AAGGCGAGAG CGTGGAACAG CTCGAGGCGG TTGCCGAGTT CATTCGCAAG
GGAACGTCCG CCGGGCCGGT TTTGGCCACC ACCTACCGCG GCATTCTGGG TTCCACCGTA
GTGGGGACCT ACGCACCGCT GACGACTCCG GACTGGGCGG TCATTGCCGA ACTGCCATGG
GAAGAAGCAT ACCGGGAACT GCTTCTCGGC ATTGTCACCT CCATGGGGAT CACATTGGCG
ATGGCCGTTC TCGCCGGCTT TTTCGGGGTT TTTGCAGCCA GGCGGTTTGC TTCTCCATTG
ATTGACCTGA CTGAAACCGC CTCCCGCATC GCCGGGGGAG AAAGGGATTT GCAGGCGGAG
GTCGCCGGTC CCCGGGAGGT GGCGCACCTG GCCACGGCTT TCAACAGCAT GACCGCGCAG
CTGCGACAGA GCCTGCAGGA TCTGCAGAAA CAATTCGATG AGCTCAAGCG GACGGAGGAT
GCCTACCGTC GCAGTGAAGA ACGACTTCGC CTGGCCGTGG AGGGAACTTC GGACGGCATC
TGGGACTGGG ATGTCCGGAC GGGACAAACT TATTTCAGCC CGAGCTATTA CACCATGGTG
GGATATGAAC CGGACGAATT TCCCGCCAAC TACCAAAACT GGCTGCAACG CGTCCACCCC
GACGACGTGG AGGAGGCCGT CAGGCTTGCG CAACGGGCGA TTGCGGAAAG CTCATCCTTC
GTCATCGAGT TCAGGTTCAA GACAAAGAAC GGAGAATGGC GATGGGTTTG CGGCCGCGGC
AAAGCCGCCG GATGGGACGC CGACGGGAAC ACAACCCGCA TGGCCGGCTT TCACAGTGAC
ATAACGGAGC GCAAGCTGGC GGAGCAGCAA ACCAGGGCCG CTCTCGAGGA AAAGGAAGTG
CTGCTTCGAG AGGTCCATCA CAGGGTCAAG AACAACCTCC AGGCCATCAT CTACCTGATC
AGATCCGAGG CCGACCAGTG CGAGGACAAG CGGGGCTCCC GATTCCTGGG AGAGCTGGAA
GAGCGCGCGC GGACCATGGC GCTCGTCTAC GAACAGTTGT ACCAGTCGGA AAATCTGGCC
CGCATCGAAA TGGTGCAGTA CCTGAGCGAC TTGGCCGCCA ACCTGGCGCA GGCATTCGGG
GCCGATCGGG ATATCCCGAT CGCGGTCGAG CCCGGGAAAA TCTGGCTCGA CGTGGAAATC
GGAATGCCCT GCGGGCTGAT TGTGAACGAG CTCGTGACGA ACGCGCTGAA GCATGCCTTC
CCGCCGGGCG CACAGGAACG GGGCAGGATA AGCGTGGCGC TCCGCAAGGA ACACGAACGG
TACGTCCTCA GGGTGAGCGA CAACGGGGTG GGTCTTCCTC CGGGGCTGCC CTGGCGCGAA
GCCCGGTCCC TCGGCCTCCG GCTCGTGAAC CTCTGGGCGA CGCACCAGCT GGGAGGGACC
ATCGCCGTGG AGGGCCCGCC GGGAACCGCC TTTGTCGTCA CCTTCCCGGC GAGGAGGGGC
CGGGCGGGCC AAAATGGCCC TTGCTAG
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| Protein sequence | MKTGPAAVCI KTARTSYPCE QESGFHGDLQ VRAFTVASNV STPSGACSRA LQTGEEAMTS
PRKSAVTTLG LSMAMALAFF SLSVAVLLLY SGLDAVRDFR AQESDIFNKQ QLAAQNAAKT
VSNFINENFS VLETAIGLSP FDRMSGTEQK QVLQTLVGLR PAFRHLVLFD DRNEVVAQAS
RLSSYASKAF IDRLKESLPG KNPPVERTIG PVHVNPATSE PMAIMALPVK NVLGDVQGTL
IVELNLKFMW DIVDRLKVGE TGYVYVADRK GNLLAFSDSG RVLKGESVEQ LEAVAEFIRK
GTSAGPVLAT TYRGILGSTV VGTYAPLTTP DWAVIAELPW EEAYRELLLG IVTSMGITLA
MAVLAGFFGV FAARRFASPL IDLTETASRI AGGERDLQAE VAGPREVAHL ATAFNSMTAQ
LRQSLQDLQK QFDELKRTED AYRRSEERLR LAVEGTSDGI WDWDVRTGQT YFSPSYYTMV
GYEPDEFPAN YQNWLQRVHP DDVEEAVRLA QRAIAESSSF VIEFRFKTKN GEWRWVCGRG
KAAGWDADGN TTRMAGFHSD ITERKLAEQQ TRAALEEKEV LLREVHHRVK NNLQAIIYLI
RSEADQCEDK RGSRFLGELE ERARTMALVY EQLYQSENLA RIEMVQYLSD LAANLAQAFG
ADRDIPIAVE PGKIWLDVEI GMPCGLIVNE LVTNALKHAF PPGAQERGRI SVALRKEHER
YVLRVSDNGV GLPPGLPWRE ARSLGLRLVN LWATHQLGGT IAVEGPPGTA FVVTFPARRG
RAGQNGPC
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