| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2623 |
|---|
| Symbol | |
|---|
| ID | 4459062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3240662 |
|---|
| End bp | 3241390 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639703394 |
|---|
| Product | ThiJ/PfpI domain-containing protein |
|---|
| Protein accession | YP_846736 |
|---|
| Protein GI | 116750049 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAT TCCACGAAGA CAGGCATCTG CACGTTGGAG CCATCATCTT CCCGCACATC
GATCAGCTCG ATTTCACGGG TCCGTTCGAA GTGCTCTCGC GCATGCCCGA TTCCTCGTTC
CATGTTCTCT GGAAAGAGCG AACTCCGGTA AGGGACGTAC GGGGATTGGT TCTGACGCCC
GACATGACGT TTGCGGAAGC ACCGCGGCTG GACGTGCTCG TGGTGCCGGG CGGATACGGT
CAGGAGGCCC TGATGGACGA TGATGCGGTT CTCTCTTTCA TTCGCGGGAG CGCGGCCGAA
GCGAAATTCG TTCTCTCCGT GTGCACGGGA GCGCTGACCT GCGGGGCCGC CGGATTGCTC
AAAGGAGTCC GGGCCACCAC GCACTGGGCT TCATTCCACC TGCTTCAGTA TTTTGGAGCG
ATTCCCGTCG ATGCGCGGGT TGTCGTCGAC GGGAGGTTCA TTTCCACCGC GGGGGTGTCC
GCGGGAATCG ACGGTGCGTT TCGGGTCCTG GCGCTGCTGC GCGGGGAGCG CCTCGCCCAG
GAGGTTCAAC TGAAGATCCA GTATGCTCCA GATCCTCCGT TCAACAGCGG CACGCCTTCG
ACCGCTCCCC CAAAAGTGCT GCAGACCGTT CTCGCGGGGG CCCGGGAAAT CACCGAAACA
CGGCTCGAGA CGGCCAAGCG CATCGCTCAG ACACTGGACT TGAAAAGCCT GTCCCCCCAG
CGCCGCTGA
|
|---|
| Protein sequence | MPKFHEDRHL HVGAIIFPHI DQLDFTGPFE VLSRMPDSSF HVLWKERTPV RDVRGLVLTP
DMTFAEAPRL DVLVVPGGYG QEALMDDDAV LSFIRGSAAE AKFVLSVCTG ALTCGAAGLL
KGVRATTHWA SFHLLQYFGA IPVDARVVVD GRFISTAGVS AGIDGAFRVL ALLRGERLAQ
EVQLKIQYAP DPPFNSGTPS TAPPKVLQTV LAGAREITET RLETAKRIAQ TLDLKSLSPQ
RR
|
|---|
| |