Gene Sfum_2603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2603 
Symbol 
ID4459077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3216483 
End bp3217064 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID639703374 
Productisochorismatase hydrolase 
Protein accessionYP_846716 
Protein GI116750029 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.966774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAG CATTGCTGGT GATCGACATG CTGAACGATT TCATGGATCC CGCAGGGGCC 
CTCTACTGCG GGGATGAGGC CCGGCGAATC ATCCCCGTTG TGAAGGCGCT CATCACCCGT
TTCGTCGCCG AAAATCAGCC GGTCATCTAC CTGCGGGACG CTCACGCCGA GGACGACAGG
GAATTCAAGC TGTTTGCGCG GCACGCCGTC AAGGACAGCT GGGGCTCGCG GATCATTCCG
GAACTGCAGC CCACGGCGGA AGCCCTGGTG GTGGACAAGG CCAGGTTCTC GGGCTTCTAC
GGGAACCGGC TTGCCGAGAT CCTCGAAGCC GCCCGCACGG AGGAAGTATG GATATCCGGC
GTGTGCACTT CCATTTGCGT CATGGATACG GCGGGCGATT CGAGGAACCG GGACTACGCC
GTGGTGATCC CGGTTGACGC CGTGGCCGAC TTTGATCCTC AGGCGCATGA AATGGCGCTG
AAGCGCATGC TCCGGGTATA CGGCGCGAAG CTCGCCACCG CCCGGGAACT CCTCGGAGGT
GAGGCTCCGT CGGCACCCTC CTCAACGAAA GGCTATACAT GA
 
Protein sequence
MRRALLVIDM LNDFMDPAGA LYCGDEARRI IPVVKALITR FVAENQPVIY LRDAHAEDDR 
EFKLFARHAV KDSWGSRIIP ELQPTAEALV VDKARFSGFY GNRLAEILEA ARTEEVWISG
VCTSICVMDT AGDSRNRDYA VVIPVDAVAD FDPQAHEMAL KRMLRVYGAK LATARELLGG
EAPSAPSSTK GYT