Gene Sfum_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2584 
Symbol 
ID4459109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3198112 
End bp3199629 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content60% 
IMG OID639703355 
ProductF0F1 ATP synthase subunit alpha 
Protein accessionYP_846697 
Protein GI116750010 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.341955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.818927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA GAGCAGAAGA AATCAGCCAG ATCATCAGAG AGCAGATCAA GGATTACGAG 
AAGCAGGTTG AACTCAGCGA GACCGGGCGC GTGCTTTCCG TAGGTGACGG AATTGCCCGC
GTCTACGGCG TCGAGAAATG CATGTCGATG GAATTGCTTG AGTTCCCTAC GGAACATGGC
GTGGTTTACG GCCTGGCCCT CAACCTGGAA GAGGACAACG TGGGTGTCGC CATCATGGGC
GAAGACATTC ACATCAAGGA GGGGTCGGAG GTCAAGCGGA CGGGGCGGAT CGCTTCGGTG
CCCGTGGGTG ACGCGGTGCT GGGGCGAATC ATCGACTCCG TGGGCAACCC GGTCGACGGC
AAGGGGCCGA TCGAGGCCAA GGAATTTTCC CGTGTCGAGG TCATCGCTCC AGGCGTCATC
GCCCGGCAGT CGGTCAACGA ACCGATGTAC ACGGGTCTGA AAGCCATCGA TGCGATGACG
CCCGTCGGCC GCGGTCAGCG GGAGCTGATC ATCGGCGACC GGCAGATCGG CAAGACGGCC
ATCGCGGTGG ACACCATCAT CAACCAGAAG GACAGCGGCA TCATCTGCAT TTATGTCGCG
GTCGGGCAGA AGAAGTCCAC GGTGGCCCAG GTGGTTGAAA CGCTGCGCAA GCACGGAGCC
ATGGATTACA CCATCGTGGT TGCGGCCAAC GCCAGCGACC CGGCGGCTCT CCAGTACATC
GCGCCTTACG CCGGCTGCGC CATGGGCGAG TACTATCGGG ATAAGGGCCG GCATGCCCTC
ATCATCTACG ACGATCTTTC CAAGCAGGCC GCCGCCTACC GGCAGGTGTC CCTGCTGCTG
CGCCGTCCAC CCGCGCGTGA AGCGTATCCG GGCGACATTT TCTACAACCA TTCGCGGCTC
CTGGAACGCG CGGCGAAGCT CAACGCCGAG CTGGGCGGCG GTTCCCTGAC GGCCCTGCCC
ATCATCGAAA CCCAGGCCGG CGACGTCTCG GCATACATTC CCACCAACGT CATTTCCATC
ACCGACGGGC AGATTTACCT CGAACCCAAC CTGTTCTTTG CCGGTGTTCG TCCCGCCATC
AACGTTGGTC TTTCCGTGTC GCGCGTCGGC GGCGCCGCTC AGACCAAGGC CATGAAGCAG
GTTGCCGGTC GTCTGCGCCT CGATCTGGCC CAGTACCGTG AACTGGAAGC ATTCGCCAAG
TTCGGAAGCG ACCTCGACAA GGCCACGCAG GCCCAGCTCA ACCGCGGCAT GCGCATGACT
GAGCTGCTCA AGCAGCCGCA GTATCAGCCG ATGCCGGCCG AGAGGGAGGT CATGTCGCTC
TACGCCGGTA CCCGGGGACA CCTCGACAAC ATCCCCGTGG AGAAGGTGCT GGAATTCGAG
AAAGAGATGC TTTCTTTCGT TGATCGTAAG TATCCGGAAA TTCTCAGCGA GATCAAAGAG
AAGAAGATCA TCAGCGAAGA GCTTGACGGT AAGATGAAGA AGGCTCTGGA AGAATTTGCC
GGGGTTTTTC AGGCTTAA
 
Protein sequence
MEIRAEEISQ IIREQIKDYE KQVELSETGR VLSVGDGIAR VYGVEKCMSM ELLEFPTEHG 
VVYGLALNLE EDNVGVAIMG EDIHIKEGSE VKRTGRIASV PVGDAVLGRI IDSVGNPVDG
KGPIEAKEFS RVEVIAPGVI ARQSVNEPMY TGLKAIDAMT PVGRGQRELI IGDRQIGKTA
IAVDTIINQK DSGIICIYVA VGQKKSTVAQ VVETLRKHGA MDYTIVVAAN ASDPAALQYI
APYAGCAMGE YYRDKGRHAL IIYDDLSKQA AAYRQVSLLL RRPPAREAYP GDIFYNHSRL
LERAAKLNAE LGGGSLTALP IIETQAGDVS AYIPTNVISI TDGQIYLEPN LFFAGVRPAI
NVGLSVSRVG GAAQTKAMKQ VAGRLRLDLA QYRELEAFAK FGSDLDKATQ AQLNRGMRMT
ELLKQPQYQP MPAEREVMSL YAGTRGHLDN IPVEKVLEFE KEMLSFVDRK YPEILSEIKE
KKIISEELDG KMKKALEEFA GVFQA