Gene Sfum_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2572 
Symbol 
ID4459122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3180218 
End bp3180889 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content61% 
IMG OID639703338 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_846685 
Protein GI116749998 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT CCGTGCTTGT GATTGCGCTG CTTCTTCTGG GATCGGCTGC CGCCTTGCTC 
GTCTTTACGG CTAGCGGACC GGGTTCCGAA GGGAAATACC CCGCCGGCAA TGCAAAACTG
GCGGAAGCGA CCTTCGCAGG TGGCTGCTTC TGGTGCATGC AGCCGCCCTT CGACAAACTG
GAAGGTGTCG TTTCGACGAC GGCGGGGTAC ACGGGGGGCA GGGAAAAGGA CCCAACCTAC
GAACAGGTGT CCGCCGGTGC AACCGGACAT GTCGAGGCCG TGCGGATCGT GTACGACCCG
AGCAGGATTT CATACGAGCA ACTCCTCGAC GTCTTCTGGC AGAATATCGA CCCGACGCAG
CCCGACGGAC AGTTCGCCGA CACAGGCCCT CAGTACCGGA CGGTCATTTT CACACACGAT
GACGAACAGC GGCTTCTGGC CGAGGCTTCC CGGCGGAAGC TGGAACAGTC CGGGAGGTAC
GACCGGGGGA TAACGACCGA AATCCTTCCC GCCACGCCGT TCTACGAGGC GGAAGAATAC
CATCAGGCGT ACTACAGGAA AAACCCGCTA CGGTACGAAT ACTACCGCCG CATGTCGGGC
AGAGACCGGC ACATTGCCGA GAAATGGGGG CGGGAGAAAC CGGCCCGCAG CGGCAAAGCC
GCGGAGAAAT GA
 
Protein sequence
MKISVLVIAL LLLGSAAALL VFTASGPGSE GKYPAGNAKL AEATFAGGCF WCMQPPFDKL 
EGVVSTTAGY TGGREKDPTY EQVSAGATGH VEAVRIVYDP SRISYEQLLD VFWQNIDPTQ
PDGQFADTGP QYRTVIFTHD DEQRLLAEAS RRKLEQSGRY DRGITTEILP ATPFYEAEEY
HQAYYRKNPL RYEYYRRMSG RDRHIAEKWG REKPARSGKA AEK