Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2547 |
Symbol | |
ID | 4459163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3142981 |
End bp | 3145035 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703313 |
Product | hypothetical protein |
Protein accession | YP_846660 |
Protein GI | 116749973 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAATC GTCTGAGCGC GGAAAAGAGT CCCTATTTGC TGCAACATGC CGACAACCCG GTGGATTGGT ACCCCTGGGG GGAGGAAGCC TTCAGGAAAG CCAAAGAGGA AGACAAACCC GTCTTCCTCT CCATCGGGTA TGCCACCTGT CACTGGTGCC ACGTCATGGA GCGGGAGTCG TTCGAGGACG AGGAGGTGGC GGCGCTGTTG AACGAGCACG TGGTGGCCGT CAAGGTCGAC CGCGAAGAAC GGCCGGATAT CGATCAAATT TACATGACCG TGTGCCAGGC ATTGCTCGGG AGCGGCGGGT GGCCTCTGTC CGTCTTCATG ACACCGGAGA AGAACGCCTT CTTTGCGGGC AGTTATTTTC CCAAGCACGC CCGCCTGGGA ATGGCCGGTT TCACGGATGT GATCCGGCGC ATCGTGCACA TGTGGAAAAA TGACCGCGAA CGGCTCCTGG AGGCCGGCAG GCAGATCACC GAGTCGATTC AGCCCAGGCC CGTGCAAACC GTCGGCTCCC TCCCCGGACC CGAGGTGTTG GAAGAGGCCT ATAGCCGGCT CAGCCGGGCC TTCGACGCCA CCTGGGGCGG TTTCGGTTCC AAACCGAAGT TCCCCACCCC CCACCATCTC ACTTTTCTTC TCAGGTGGCA CCGGAGAAAT CCCTGGTCCG ACGCCCTTGC CATTGTCGAG AAAACACTCG ACGGCATGCG GGACGGCGGG ATCTTCGACC AGGTCGGTTT CGGCTTTCAC CGCTACTCCG TGGATGAAAA ATGGCTTGTC CCCCACTTCG AGAAGATGCT CTACGACCAG GCCATGCTGG CCCTGGCCTA CCTGGAGGCC TTCCAGGTAA CGGGCAGGGA ACGCCACGGC CGGGTTGCGC GCGAGATCTT CGAATACGTG CTGCGCGACA TGACGGATCC GGACGGCGGT TTCTACTCGG CCGAAGACGC CGACAGCGAA GGGGTGGAAG GCCGTTTCTA CGTCTGGACC CCGGCGGAGG TGAATGCCCT GCTGGGAAAT GAAATCGGGG AAACGTTCTG CCGGTTCTTC GACATCACCC CGGAGGGCAA CTTCGAGGAC GGGCGGAGCA TCCCGCACCT TGCGGAGCTC GCGGATTCCC TTTCCGACCG TGATGAGCCG GGAATCGGGG GTCTTGAGGA CCTGCTCGAA AAGGGAAGGC GCCTGTTGTT CGAAGCCCGC CGGATGCGTG TGCACCCGCT GAAAGACGAC AAGATCCTCA CTTCCTGGAA CGGGTTGATG ATCGCCGCCC TGAGCAAAGG GTCCCGGGCG CTGGGAGACC GTTCATACGC CCTAGCCGCT TCACGCGCCG CGGATTTCAT CCTCGACAGG ATGCGAAGGG ATTCCGGACG GCTCCATCGC CGCTACCGGA AAGGCGAAGC CGCGATCCAT GCCTATGCGG ACGATTACGC CTTCTTCATA TGGGGGTTGA TCGAGCTCTA CGAGGCCGCC TTCGACGTGC GGTACCTTGA GGAGGCCGTG AAGCTCCAGG ATCTCATGAT CGACCTGTTC TGGGATGACG CCGAGGGGGG GTTCTTCTTT ACCCCCAACG ACGGGGAGAA CCTCATCGTG CGCGAACGGG AAATATACGA CGGCGCGGTG CCGTCGAGCA ATTCAGCGGC GGCGCTGAAC CTCCTGCGCC TCGGGCGCAT GGTCGGCGCC GTGCGGTTCG AGGAGAAAGC GGACCGGCTG CTTCGTAGAT TCTCCGAAAC GGTTCGGGAT TATCCTTCCG CTTACACCCA GTTTCTCCAT GCCGTCGATT TCGCCGCCGG CCCGACCCGG GAAGTCGTGA TCGCCGGGTC TCCCGACAAC GCAACCACCG CCGAAATGAT GAAGATCGTC GGGAGCGGTT TTGTGCCCAA CACCGTGGTC CTCCTGCGCG GGACCCCGGA GAGCGGAGCC AGGCTGGCCG AGCTCGCCCC GTACACCGCG GGGCTCGTCG CTCCGGGCGG CAATCCGGCC GTCTACATCT GCGAAAAATT TGCCTGCACA AGTCCGATCA CCGAAATCGA GGAACTGCGG GAAACCTTCG GTTGA
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Protein sequence | MPNRLSAEKS PYLLQHADNP VDWYPWGEEA FRKAKEEDKP VFLSIGYATC HWCHVMERES FEDEEVAALL NEHVVAVKVD REERPDIDQI YMTVCQALLG SGGWPLSVFM TPEKNAFFAG SYFPKHARLG MAGFTDVIRR IVHMWKNDRE RLLEAGRQIT ESIQPRPVQT VGSLPGPEVL EEAYSRLSRA FDATWGGFGS KPKFPTPHHL TFLLRWHRRN PWSDALAIVE KTLDGMRDGG IFDQVGFGFH RYSVDEKWLV PHFEKMLYDQ AMLALAYLEA FQVTGRERHG RVAREIFEYV LRDMTDPDGG FYSAEDADSE GVEGRFYVWT PAEVNALLGN EIGETFCRFF DITPEGNFED GRSIPHLAEL ADSLSDRDEP GIGGLEDLLE KGRRLLFEAR RMRVHPLKDD KILTSWNGLM IAALSKGSRA LGDRSYALAA SRAADFILDR MRRDSGRLHR RYRKGEAAIH AYADDYAFFI WGLIELYEAA FDVRYLEEAV KLQDLMIDLF WDDAEGGFFF TPNDGENLIV REREIYDGAV PSSNSAAALN LLRLGRMVGA VRFEEKADRL LRRFSETVRD YPSAYTQFLH AVDFAAGPTR EVVIAGSPDN ATTAEMMKIV GSGFVPNTVV LLRGTPESGA RLAELAPYTA GLVAPGGNPA VYICEKFACT SPITEIEELR ETFG
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