Gene Sfum_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2547 
Symbol 
ID4459163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3142981 
End bp3145035 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content62% 
IMG OID639703313 
Producthypothetical protein 
Protein accessionYP_846660 
Protein GI116749973 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATC GTCTGAGCGC GGAAAAGAGT CCCTATTTGC TGCAACATGC CGACAACCCG 
GTGGATTGGT ACCCCTGGGG GGAGGAAGCC TTCAGGAAAG CCAAAGAGGA AGACAAACCC
GTCTTCCTCT CCATCGGGTA TGCCACCTGT CACTGGTGCC ACGTCATGGA GCGGGAGTCG
TTCGAGGACG AGGAGGTGGC GGCGCTGTTG AACGAGCACG TGGTGGCCGT CAAGGTCGAC
CGCGAAGAAC GGCCGGATAT CGATCAAATT TACATGACCG TGTGCCAGGC ATTGCTCGGG
AGCGGCGGGT GGCCTCTGTC CGTCTTCATG ACACCGGAGA AGAACGCCTT CTTTGCGGGC
AGTTATTTTC CCAAGCACGC CCGCCTGGGA ATGGCCGGTT TCACGGATGT GATCCGGCGC
ATCGTGCACA TGTGGAAAAA TGACCGCGAA CGGCTCCTGG AGGCCGGCAG GCAGATCACC
GAGTCGATTC AGCCCAGGCC CGTGCAAACC GTCGGCTCCC TCCCCGGACC CGAGGTGTTG
GAAGAGGCCT ATAGCCGGCT CAGCCGGGCC TTCGACGCCA CCTGGGGCGG TTTCGGTTCC
AAACCGAAGT TCCCCACCCC CCACCATCTC ACTTTTCTTC TCAGGTGGCA CCGGAGAAAT
CCCTGGTCCG ACGCCCTTGC CATTGTCGAG AAAACACTCG ACGGCATGCG GGACGGCGGG
ATCTTCGACC AGGTCGGTTT CGGCTTTCAC CGCTACTCCG TGGATGAAAA ATGGCTTGTC
CCCCACTTCG AGAAGATGCT CTACGACCAG GCCATGCTGG CCCTGGCCTA CCTGGAGGCC
TTCCAGGTAA CGGGCAGGGA ACGCCACGGC CGGGTTGCGC GCGAGATCTT CGAATACGTG
CTGCGCGACA TGACGGATCC GGACGGCGGT TTCTACTCGG CCGAAGACGC CGACAGCGAA
GGGGTGGAAG GCCGTTTCTA CGTCTGGACC CCGGCGGAGG TGAATGCCCT GCTGGGAAAT
GAAATCGGGG AAACGTTCTG CCGGTTCTTC GACATCACCC CGGAGGGCAA CTTCGAGGAC
GGGCGGAGCA TCCCGCACCT TGCGGAGCTC GCGGATTCCC TTTCCGACCG TGATGAGCCG
GGAATCGGGG GTCTTGAGGA CCTGCTCGAA AAGGGAAGGC GCCTGTTGTT CGAAGCCCGC
CGGATGCGTG TGCACCCGCT GAAAGACGAC AAGATCCTCA CTTCCTGGAA CGGGTTGATG
ATCGCCGCCC TGAGCAAAGG GTCCCGGGCG CTGGGAGACC GTTCATACGC CCTAGCCGCT
TCACGCGCCG CGGATTTCAT CCTCGACAGG ATGCGAAGGG ATTCCGGACG GCTCCATCGC
CGCTACCGGA AAGGCGAAGC CGCGATCCAT GCCTATGCGG ACGATTACGC CTTCTTCATA
TGGGGGTTGA TCGAGCTCTA CGAGGCCGCC TTCGACGTGC GGTACCTTGA GGAGGCCGTG
AAGCTCCAGG ATCTCATGAT CGACCTGTTC TGGGATGACG CCGAGGGGGG GTTCTTCTTT
ACCCCCAACG ACGGGGAGAA CCTCATCGTG CGCGAACGGG AAATATACGA CGGCGCGGTG
CCGTCGAGCA ATTCAGCGGC GGCGCTGAAC CTCCTGCGCC TCGGGCGCAT GGTCGGCGCC
GTGCGGTTCG AGGAGAAAGC GGACCGGCTG CTTCGTAGAT TCTCCGAAAC GGTTCGGGAT
TATCCTTCCG CTTACACCCA GTTTCTCCAT GCCGTCGATT TCGCCGCCGG CCCGACCCGG
GAAGTCGTGA TCGCCGGGTC TCCCGACAAC GCAACCACCG CCGAAATGAT GAAGATCGTC
GGGAGCGGTT TTGTGCCCAA CACCGTGGTC CTCCTGCGCG GGACCCCGGA GAGCGGAGCC
AGGCTGGCCG AGCTCGCCCC GTACACCGCG GGGCTCGTCG CTCCGGGCGG CAATCCGGCC
GTCTACATCT GCGAAAAATT TGCCTGCACA AGTCCGATCA CCGAAATCGA GGAACTGCGG
GAAACCTTCG GTTGA
 
Protein sequence
MPNRLSAEKS PYLLQHADNP VDWYPWGEEA FRKAKEEDKP VFLSIGYATC HWCHVMERES 
FEDEEVAALL NEHVVAVKVD REERPDIDQI YMTVCQALLG SGGWPLSVFM TPEKNAFFAG
SYFPKHARLG MAGFTDVIRR IVHMWKNDRE RLLEAGRQIT ESIQPRPVQT VGSLPGPEVL
EEAYSRLSRA FDATWGGFGS KPKFPTPHHL TFLLRWHRRN PWSDALAIVE KTLDGMRDGG
IFDQVGFGFH RYSVDEKWLV PHFEKMLYDQ AMLALAYLEA FQVTGRERHG RVAREIFEYV
LRDMTDPDGG FYSAEDADSE GVEGRFYVWT PAEVNALLGN EIGETFCRFF DITPEGNFED
GRSIPHLAEL ADSLSDRDEP GIGGLEDLLE KGRRLLFEAR RMRVHPLKDD KILTSWNGLM
IAALSKGSRA LGDRSYALAA SRAADFILDR MRRDSGRLHR RYRKGEAAIH AYADDYAFFI
WGLIELYEAA FDVRYLEEAV KLQDLMIDLF WDDAEGGFFF TPNDGENLIV REREIYDGAV
PSSNSAAALN LLRLGRMVGA VRFEEKADRL LRRFSETVRD YPSAYTQFLH AVDFAAGPTR
EVVIAGSPDN ATTAEMMKIV GSGFVPNTVV LLRGTPESGA RLAELAPYTA GLVAPGGNPA
VYICEKFACT SPITEIEELR ETFG