Gene Sfum_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2534 
Symbol 
ID4459150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3124931 
End bp3125839 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID639703300 
Productrestriction endonuclease 
Protein accessionYP_846647 
Protein GI116749960 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.983155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTC CGGATTATGA GTCGATAATG CTACCCTTAT TGAGGTTTGC CGGTGATGGC 
AAAGAGCATT CCGCCAAGGA GGCTGCGCAG GCTCTTGCCG TTGAATTTGC TTTGAGCGAG
AGTGAATTGA AACAACTACT TCCGAGCGGC CGGCAAACGA CCTTCGGCAA CCGGATCGGA
TGGGCCGGGA CATACCTGAA GAAAGCGGGT CTTCTTCAGT CATCCAGAAG GGGTATCTTT
CAAATAACCG CACGTGGGCT CCAGCTCCTC GCGGAAAAGC CAATTCAGCT GAATAGTGCG
TCTCTTCACC GTTTTCCCGG ATTTGTCGAG TTCATAGAGG CACGAAAAGG GAAGGCGGCC
ATTCCATCCG ATGATGACCC AATCAATCGC GAGACTCCGG AAGAAGTTAT TGAAGCAGCC
TATCAGCGGA TTCGGCAAGA CCTGGCTTCG GAATTATTGC AGACCATCAA GAACTGCTCG
GCCACTTTTT TTGAGCGGCT TGTCGTGGAT CTCATTGTGA AAATGGGGTA TGGCGGCACA
AGGAAGGATG CTGGTGAGGC CATCGGGAAA AGTGGTGATG AAGGCATTGA CGGGATTATC
AAAGAGGACC GTTTGGGGCT GGACATTGTA TATATCCAAG CCAAAAGATG GGACAGCCAG
GTTGGCCGGC CGGAAGTCCA AAAGTTTGCC GGGGCCTTAC AGGGCCAACG GGCAAAAAAG
GGCATCTTCC TTACAACATC CGCTTTCACA AAAGAGGCCA GAGATTACGT CTCCAGGATT
GAAAGCAAAA TCGTCCTCAT AGATGGCGAC TTATTGGCTC AGTTGATGAT AGATTTCAAC
ATAGGAGTAG CTGCTGTCGC CTCCTATGAA TTAAAGCGCA TCGATTCCGA TTACTTTACC
GAGGAATGA
 
Protein sequence
MAIPDYESIM LPLLRFAGDG KEHSAKEAAQ ALAVEFALSE SELKQLLPSG RQTTFGNRIG 
WAGTYLKKAG LLQSSRRGIF QITARGLQLL AEKPIQLNSA SLHRFPGFVE FIEARKGKAA
IPSDDDPINR ETPEEVIEAA YQRIRQDLAS ELLQTIKNCS ATFFERLVVD LIVKMGYGGT
RKDAGEAIGK SGDEGIDGII KEDRLGLDIV YIQAKRWDSQ VGRPEVQKFA GALQGQRAKK
GIFLTTSAFT KEARDYVSRI ESKIVLIDGD LLAQLMIDFN IGVAAVASYE LKRIDSDYFT
EE