| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2521 |
|---|
| Symbol | |
|---|
| ID | 4459168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3106027 |
|---|
| End bp | 3106734 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639703285 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_846634 |
|---|
| Protein GI | 116749947 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGA GCGACCCCGT TGTCGGCAAA CCGCTGGTGT CGGTCGAGAA CATCCATAAG
TCCTACCGGC GGGGTTCCCA GTCGATTTCG GTGTTGCGGG GTATAGACCT GAGCGTCGGC
CGAGGGGATT TCATCGCCCT GATGGGACCC TCCGGTTCCG GCAAGACCAC CCTGCTCAAC
CTCATCGCCG GCCTGGACAG GCCCGACCAG GGCAGTCTGA TCGTTGCCGG AACCGACATC
ACCCAACTCG GCGAGCTCGA CCTGGCCCGC TGGCGGGCGA TTCACATCGG GTTCATATTC
CAGTTCTACA ATCTCCTCCC TGTGCTGACC GGGCTCGAAA ACGTGGAGTT GCCGCTGCTG
CTTCGGAATC TCAGCCGCCG GGAACGCCGC GAGCACGCCA TGACGGCTCT CGAGTTGGTC
GGGTTGGCGG ACCGTGTGAA GCACACCCCG CGGGAGCTCT CCGGCGGGCA GCAACAGCGG
GTTGCCATTG CCCGGGCCAT TGTGACGGAC CCCACGCTGC TCGTCGCGGA CGAACCCACC
GGCGATCTCG ACAAGAACTC CGCCATGGAG GTGCTCGAAC TGCTCGAGCA GCTCAACCGC
GAATTCAACA AGACCATCAT CATGGTGACC CATGACCCCA GGGCCGCGGA CAAGGCCCGG
CTCATCCATC ACCTGGACAA GGGCACCCTG GAGAGCCCCG GCAAGTGA
|
|---|
| Protein sequence | MTRSDPVVGK PLVSVENIHK SYRRGSQSIS VLRGIDLSVG RGDFIALMGP SGSGKTTLLN
LIAGLDRPDQ GSLIVAGTDI TQLGELDLAR WRAIHIGFIF QFYNLLPVLT GLENVELPLL
LRNLSRRERR EHAMTALELV GLADRVKHTP RELSGGQQQR VAIARAIVTD PTLLVADEPT
GDLDKNSAME VLELLEQLNR EFNKTIIMVT HDPRAADKAR LIHHLDKGTL ESPGK
|
|---|
| |