Gene Sfum_2519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2519 
Symbol 
ID4459199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3103630 
End bp3104328 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID639703283 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_846632 
Protein GI116749945 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGG ATGTTCTGAA AACACGGCGT GATTTTCTTG TCGTTACGGG CGCCGCGGGA 
GCCGGCCTGC TGCTCGCCGG GTGCTCGGGA GAAGAGAAGA AGAGGGCCGC GGATCTCATC
TCCGCGCCGG AACGGTTGAT GCGCCAACAC GGCGTGTTGA GCCGCCTGCT CATGATCCTC
GAGGAGTCCC TGCGCCGAGT GGATGCGCAC ATGGAATTGC CCCTCGAGGT CATTCCCGGC
GTGGTCGAGG TCGTGCAGAA TTTTGTCCAA ATGCACCACG AGAAACAGGA GGAGGAAGAA
ATCTTCCCGC TCTTGGCCAA TAACGACAAG CTGGTCGGAC TGATCGCCGT GCTGAAGGCG
CAGCACCGGG CAGGCCGCGA AATCACGGCA CGGATCCTGG AGTACTCTTC GACTGCGGCT
TTGAAGGAAC TCGAGACGCG CCGTAAATTG AACTCGGAGG TGCGCCAGCT CGCGCGCATG
TACCGGGCCC ACTCCAACCG TGAAGACACG GTGCTCTTCC CGGCACTGGA TTCGGCGGTC
ACCGCCGCGC AATACCGGGC GCTGTCGGCC GGAATGACTC AAAAACAACA GCAGGCGCCG
GGAGACGGGG CGTTCGAGAA GACCGTCGAG CGGGTGGCCG CCCTGGAAAA GCTGGTCGCC
ATGGACGATC TCGCCGGGTT TTCACCCGAC GCCTCGTAG
 
Protein sequence
MASDVLKTRR DFLVVTGAAG AGLLLAGCSG EEKKRAADLI SAPERLMRQH GVLSRLLMIL 
EESLRRVDAH MELPLEVIPG VVEVVQNFVQ MHHEKQEEEE IFPLLANNDK LVGLIAVLKA
QHRAGREITA RILEYSSTAA LKELETRRKL NSEVRQLARM YRAHSNREDT VLFPALDSAV
TAAQYRALSA GMTQKQQQAP GDGAFEKTVE RVAALEKLVA MDDLAGFSPD AS