Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2519 |
Symbol | |
ID | 4459199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3103630 |
End bp | 3104328 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703283 |
Product | hemerythrin HHE cation binding domain-containing protein |
Protein accession | YP_846632 |
Protein GI | 116749945 |
COG category | [S] Function unknown |
COG ID | [COG3945] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCGG ATGTTCTGAA AACACGGCGT GATTTTCTTG TCGTTACGGG CGCCGCGGGA GCCGGCCTGC TGCTCGCCGG GTGCTCGGGA GAAGAGAAGA AGAGGGCCGC GGATCTCATC TCCGCGCCGG AACGGTTGAT GCGCCAACAC GGCGTGTTGA GCCGCCTGCT CATGATCCTC GAGGAGTCCC TGCGCCGAGT GGATGCGCAC ATGGAATTGC CCCTCGAGGT CATTCCCGGC GTGGTCGAGG TCGTGCAGAA TTTTGTCCAA ATGCACCACG AGAAACAGGA GGAGGAAGAA ATCTTCCCGC TCTTGGCCAA TAACGACAAG CTGGTCGGAC TGATCGCCGT GCTGAAGGCG CAGCACCGGG CAGGCCGCGA AATCACGGCA CGGATCCTGG AGTACTCTTC GACTGCGGCT TTGAAGGAAC TCGAGACGCG CCGTAAATTG AACTCGGAGG TGCGCCAGCT CGCGCGCATG TACCGGGCCC ACTCCAACCG TGAAGACACG GTGCTCTTCC CGGCACTGGA TTCGGCGGTC ACCGCCGCGC AATACCGGGC GCTGTCGGCC GGAATGACTC AAAAACAACA GCAGGCGCCG GGAGACGGGG CGTTCGAGAA GACCGTCGAG CGGGTGGCCG CCCTGGAAAA GCTGGTCGCC ATGGACGATC TCGCCGGGTT TTCACCCGAC GCCTCGTAG
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Protein sequence | MASDVLKTRR DFLVVTGAAG AGLLLAGCSG EEKKRAADLI SAPERLMRQH GVLSRLLMIL EESLRRVDAH MELPLEVIPG VVEVVQNFVQ MHHEKQEEEE IFPLLANNDK LVGLIAVLKA QHRAGREITA RILEYSSTAA LKELETRRKL NSEVRQLARM YRAHSNREDT VLFPALDSAV TAAQYRALSA GMTQKQQQAP GDGAFEKTVE RVAALEKLVA MDDLAGFSPD AS
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