Gene Sfum_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2488 
Symbol 
ID4459203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3069021 
End bp3070172 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content58% 
IMG OID639703253 
Productpeptidase M50 
Protein accessionYP_846602 
Protein GI116749915 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCT ACGCGAATGC CCGAAAAGAC GTCGGGAAGA TCAATTTGTT CAGGGTCGGC 
GGGATCCGGA TATCCATCGA CTTCTCGTGG TTCGTCATTT TCGTGCTGAT TCTGTGGAGT
CTGTCCGTGG GGTATTTTCC GCGGGAGTTT CCGGCCCAGA ACGCCTACAG CTACTGGGGA
GCCGGGATCG TGGCCACGCT CCTGTTCTTC CTGTCGGTGA TCTTTCATGA GCTGGCCCAC
TCCCTGATCG CGATTCGTTC CGGGCTGCAG ATTCCCGAGA TCACCCTCTT TATTTTCGGC
GGGATCTCGA AATTGTCGGA AGACGCCAAG GACGCCGCCG ACGAGTTCAA AATCGCGGTC
GTGGGGCCTC TGAGCAGCTT CGTGCTGGCG GTTGTCTTCA TGTTCCTCGA AAAAGCCGCC
CGCTCCATGC AACTCCCGAT GACGGCCGTC ATATTCGGCT ATCTCACCTG GATCAATTTC
GCTCTGGCCG TTTTCAACCT CATCCCCGGC TTCCCCCTGG ACGGCGGCCG CATACTGCGC
GCGTTTCTCT GGTGGAAGAC GGGGTCTCTG ACCAACGCCA CGAAATACGC CTCGGACGTG
GGAAAGGGAT TGGCAGTGGC CATGATGATC CTCGGAGGGA TACAGATTTT CGGCGGAATG
CTGATCGGAG GTTTGTGGCT CATCTTCATC GGGGCTTTTC TCAGGGGGGT GGCCGAGGGA
AGCTACCAGG AAGTCCTGAT GCGGCAGTCC CTGGAGGGAG TGAAGGTCGA TGAGGTCATG
GTGAGAGAAG TCATCGGCGT GCCTCCGGAC CTGCCCGTGA GCCGCCTCAT TTCGGCCTAT
CTGCTGCGCT ACGGCTACAA GGGATACCCC GTGATGGAAA GGGCCGGTGA GCCCATCGGC
ATCGTGGAAA TATTCCACAT CAAGGACATC CATGAAGAGG ACCGCCAATC CCGGACCGTC
GCCGAGGTGA TGGAACCGAT CAACCCCGAC CTCGTCGTGG AACCGGACTT GCCCTTGATC
GATGCGCTGA AGAAGATCGG CGACAGCGAT CTGGGGCGTC TGCTCGTGAT TCAAGACAAA
CAGATGGTCG GTCTGATCAC CAAGAGCGGC CTGAACCGTT TCCTCGAGAT CCGCAGCATC
CTGGGGTCAT GA
 
Protein sequence
MPSYANARKD VGKINLFRVG GIRISIDFSW FVIFVLILWS LSVGYFPREF PAQNAYSYWG 
AGIVATLLFF LSVIFHELAH SLIAIRSGLQ IPEITLFIFG GISKLSEDAK DAADEFKIAV
VGPLSSFVLA VVFMFLEKAA RSMQLPMTAV IFGYLTWINF ALAVFNLIPG FPLDGGRILR
AFLWWKTGSL TNATKYASDV GKGLAVAMMI LGGIQIFGGM LIGGLWLIFI GAFLRGVAEG
SYQEVLMRQS LEGVKVDEVM VREVIGVPPD LPVSRLISAY LLRYGYKGYP VMERAGEPIG
IVEIFHIKDI HEEDRQSRTV AEVMEPINPD LVVEPDLPLI DALKKIGDSD LGRLLVIQDK
QMVGLITKSG LNRFLEIRSI LGS