| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2479 |
|---|
| Symbol | |
|---|
| ID | 4459229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3058959 |
|---|
| End bp | 3059435 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639703245 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_846594 |
|---|
| Protein GI | 116749907 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGGGC CTTACATCGG AGTAATCGGA ACGGGTGAGT CCGATCCGGG TCTCGACGAC
ATGGCTGTGG CCGTGGGCCG CGAGGTCGCC AGGCGCGGAG GCGTTCTGGT GTGTGGCGGT
CTGGGCGGCG TGATGACTGC CGCCGCCCTG GGAGCGAAGG AGGAAGGCGG CTTCACCGTG
GGGATACTGC CCGGGTCGCA TGTCGAAGAC GCGAATCATT TCATCGATTT TCCCATTGCG
AGCAACATGG GGCAGGCGCG TAACGCCATC ATCGTCCAAA CCGCGCACGT GCTGATCGCG
GTCGGCGGCG GCTACGGCAC CCTGTCGGAG ATCGCCATGG CGCTGAAGAT GGGGAAGAAA
GTGGTTGCGC TTCATCCGGA GTTCGAAATC CCGGGTGTCC GGTCGGCGCA ATCGCCGGCC
GAGGCTGTGA GTCTGGCTTA CCAGTTGATC GAGGCGCCTG CCGATATCGT GGTCTGA
|
|---|
| Protein sequence | MRGPYIGVIG TGESDPGLDD MAVAVGREVA RRGGVLVCGG LGGVMTAAAL GAKEEGGFTV
GILPGSHVED ANHFIDFPIA SNMGQARNAI IVQTAHVLIA VGGGYGTLSE IAMALKMGKK
VVALHPEFEI PGVRSAQSPA EAVSLAYQLI EAPADIVV
|
|---|
| |