Gene Sfum_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2465 
Symbol 
ID4459250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3044905 
End bp3045552 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID639703231 
Productclass II aldolase/adducin family protein 
Protein accessionYP_846580 
Protein GI116749893 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.430266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAG AAACGGCATT GCGGTCGGAA TTAGTGGCAA TCTGCAGGAA ACTCGAACGT 
AAAGGGCTGA TCGCCTCGGC CGACGGCAAC GTGAGTTGCC GGGTGGGCGC GGACCGTCTG
CTCATCACGC CAAGCGGCAA GCCCAAGACA GACCTGGAAC CGCGCGACCT GATCGGGGTG
AATGCGCTGG GAGAGCGGGT GTCAGGCCAT GGCAGACCTT CCAGTGAAAT CCATATGCAT
CTGGCCGTGT ATGCTCAACG AAGCGACGTT TCGGCAATCG TCCACGCCCA CCCGCCTCTT
CTCACCGCCA TGACCCTCGC GGGACAGCCT TTCCGCGCCG ACATTCTCCC CGAAGTGTGG
CTGACCGTCG GCACAGTGCC CACGGCCCCC TACGCGACCC CTTCCACCTC TGAGGTACCC
GACTCCATTG CCCCGTTCAT CGCGGACCAC CATGCCATTC TGCTGGAGCG GCACGGTTCG
CTCACTTTCG GCAGGACCCT CGGAGAGGCT TACCGGCGGC TCGAAATACT GGAGCACGCC
GCGCACACCC TGTTCTACGC CTTGCTCATC GGGGGCTGTC CGCCACCCGC GATGCCGGAT
AAGGACAGGG AAAAACTGGA CCAGGTGCGC AAGAAGCTCT TTGCGTGA
 
Protein sequence
MREETALRSE LVAICRKLER KGLIASADGN VSCRVGADRL LITPSGKPKT DLEPRDLIGV 
NALGERVSGH GRPSSEIHMH LAVYAQRSDV SAIVHAHPPL LTAMTLAGQP FRADILPEVW
LTVGTVPTAP YATPSTSEVP DSIAPFIADH HAILLERHGS LTFGRTLGEA YRRLEILEHA
AHTLFYALLI GGCPPPAMPD KDREKLDQVR KKLFA