Gene Sfum_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2452 
Symbol 
ID4459237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3030411 
End bp3030854 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID639703218 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_846567 
Protein GI116749880 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGC TGCAACTCAG TGGTCCGGTT ATTCTTGACA TTCCGACCGA TCCGGCGTCG 
CTCTTCCTGG TGCGGGGGGT TGTGGAACGG TTGGCCCAAC GCATGGACTA TCCGCCCGAG
GACGTCAACC GGATGGTGCT GGCGGTGGAT GAAGCCTGCA CCAATGTGAT TCGCCACGCC
TACGCGAACA GCCCGGACAA GAGGATTGTC ATCACCTTCA CCGCCCACGA GGATCGACTC
GAGATCGGTA TCAGGGACTT CGGGATTCCG GCGGACCCGG ATGGTTTCGC ACCGCGGGAT
CTCCAGGAAG TCAAGCCCGG CGGGCTGGGA CTGCACTTTA TCAGGAGCGC GATGGATGAG
ATCACCTACG ACATCCCTGC CGATGGAGGG ATGTTGCTCA GGCTCGTCAA ATACAGAACC
CACAGGGAGG AGCCCAGGAA GTGA
 
Protein sequence
MSLLQLSGPV ILDIPTDPAS LFLVRGVVER LAQRMDYPPE DVNRMVLAVD EACTNVIRHA 
YANSPDKRIV ITFTAHEDRL EIGIRDFGIP ADPDGFAPRD LQEVKPGGLG LHFIRSAMDE
ITYDIPADGG MLLRLVKYRT HREEPRK