Gene Sfum_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2433 
Symbol 
ID4459253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3005364 
End bp3007100 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content57% 
IMG OID639703199 
Productsodium/hydrogen exchanger 
Protein accessionYP_846548 
Protein GI116749861 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAG TGAATCTCTT GTCGAACATC GGGCTTGCCA TTGTCGTCGC AACCGGCTTT 
GCGCTTCTTG CCAGGGCTTT CAAGCAGCCG CTGCTTCTGG CCTACCTGGC AGCCGGGATC
GTGCTCGGTC CGAAGATCGG TTTCGGACTG ATCGAGGATG AGGCCAGCAT CACTCTCATC
TCCGAAATCG GGCTTATTTT GCTTCTCTTC ATCATCGGCC TCGAGATCGA CCTGAAGAAG
CTTCTTTCGG CCGGGCGGAC TCTCATCATT TCGGGGATCT CCCAATTCCT CATCTGCACG
GCGCTTGGAA TCGGCTTTTT TGTCCTTCTC GGCTTCCAGC TCGGGGGAGG CAGGTTCGAC
GCGCTGTATC TTGCGGTCGC CATGGCCTTG AGCAGCACCA TGATCGTCGT GAAGATCCTT
TACGACAAAT TCGAGCTCAC CACTTTGCCC GGCCGGATCA CTCTCGGGAT ACTCGTCTTT
CAGGACATCT GGGCCATACT GTTCCTCTCC CTCCAGCCGA ATCTCCTGAG CCCCGGAGTG
TCGACCATTC TGCTTTCATT CGTGAAGGGC GCCGGACTCG TGCTGTTCAG CCTTTCGGTG
AGCAGGTACC TTCTGGCGCA CGTGTTCTCG TTCATCGCGA AGATCCCGGA GCTGCTGCTC
ATTACGGCCG TGGCCTGGTG CTTTCTCATA AGCGGCATTG CGGACGAGGT GGGGCTTTCG
AAGGAAATGG GAGCCCTGGT GGCCGGAGTG AGCCTCTCGA CATTTCCTTA CAACATCGAT
GTGATCGCCA AGGTCATCAA CATCAGGGAC TTCTTCGTGA CGCTCTTCTT TGTCGGGCTG
GGGCTCCAGA TTCCCGTTCC AACGGTCTCG CTGCTTGCCT ATGCGGCCGT CGCCTCCACG
TTTCTCGTCC TCACCCGGTT CCTTTCCATT TTTCCCGTTC TCCATTCCAT GAAGAACGGC
CTGAGGGCGA GTCTCATCCC CTCCATCAAT CTTTCTCAGA TGAGCGAGTT TTCCCTGGTC
ATCGCGTCCC TCGGGCTCGG GTTCAACCAC ATCGATCCCC AGGTGGTGGG GATTCTCACT
TTTGTCTTTG CCATCACTTC GGTTGCGTCG ACCTACATGA TCCAGTACAA TCACGAGATC
CAGGCGAAGA TCGCTCCTGT GCTCCGCAGA ATCGGCTTGA GGGATATCGA CCAACAACCC
GCCGCGGGGG AGGGGGCGAA AGAGCAAAAG GAGATCGTTT TTCTGGGTTT CTTCAGGGAG
GCGAGCTCGA TCTTTCACGA AATCGAATCC ATCCGGGATG GAAACGGGGT TCCTCTCAAG
GACAAGGTAC TGGTGGTCGA TTTCAACCCC GTGGTCCACT GCGAGCTCAC CAAACGCGAT
GTGGAGTGCA TCTACGGGGA TATTTCCAGT GTGGACACGC TGATGCACGC CCACTTCGAT
TACTCGAAAA CGCTGGTGTG CACCATCCCG GATTCCGTCC TGCGCGGCAT CACCAACGAG
AGGCTGCTGA ACCTCTCAAG GCGCCTGTGC CCGCAGGCCC GGATCATAGT CACCGCCAAT
ACCCTCCAGA CGGCCTTGCA CCTCTACCGG CAGGGCGCGG ACTTCGTCTT CATCCCGAGA
ATACACTCCG CCAGGTTCCT GGCGGAAATC ATCTCCCATT CCCTGCACGA AGACCTCGAT
CGCTACCGGG ATGAAGAAAT GACGCACCTC ATGGACCGAA GAGAAGTGCT CGATTGA
 
Protein sequence
MHEVNLLSNI GLAIVVATGF ALLARAFKQP LLLAYLAAGI VLGPKIGFGL IEDEASITLI 
SEIGLILLLF IIGLEIDLKK LLSAGRTLII SGISQFLICT ALGIGFFVLL GFQLGGGRFD
ALYLAVAMAL SSTMIVVKIL YDKFELTTLP GRITLGILVF QDIWAILFLS LQPNLLSPGV
STILLSFVKG AGLVLFSLSV SRYLLAHVFS FIAKIPELLL ITAVAWCFLI SGIADEVGLS
KEMGALVAGV SLSTFPYNID VIAKVINIRD FFVTLFFVGL GLQIPVPTVS LLAYAAVAST
FLVLTRFLSI FPVLHSMKNG LRASLIPSIN LSQMSEFSLV IASLGLGFNH IDPQVVGILT
FVFAITSVAS TYMIQYNHEI QAKIAPVLRR IGLRDIDQQP AAGEGAKEQK EIVFLGFFRE
ASSIFHEIES IRDGNGVPLK DKVLVVDFNP VVHCELTKRD VECIYGDISS VDTLMHAHFD
YSKTLVCTIP DSVLRGITNE RLLNLSRRLC PQARIIVTAN TLQTALHLYR QGADFVFIPR
IHSARFLAEI ISHSLHEDLD RYRDEEMTHL MDRREVLD