| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2401 |
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| Symbol | |
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| ID | 4459285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2964840 |
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| End bp | 2967815 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639703166 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_846517 |
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| Protein GI | 116749830 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.986059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCTGC ATTCAAAACA TCTTGAAAAT TTATGCGTTT TCAGATTTAC TCCAATTATT
CGTTGCAAGC ATATTCCAAG AAACGAACCA TTCTTGAATA CAGTCCTGGA CAGTGACATG
AAAATCATCG GTCGCTTCAT CGTGTTTGTG ATTCTGGTTG GGTTGACCGG GTATGTGCTC
TACTCCGCCT ATAGCGAAGT CGAGACGAAA ACCATCGATC AGCTGAATGC TCAGCAGATG
ACCCATGCCC GACAGGCGGC AAGAGGGATC GAAGACTATT TCGAAAGCAA GCTGAATATG
CTGGCGTTCC TTTCGAAATC AGAGCACATC ATCAACCTGG ATGAAGAGGG CAGACAAATC
CTGGCACTTC TTTATTATGA GCACAGCGAG AGCATGTCCG CGATCACCCG CGTGGATGCC
GACGGCCGGA TAATGTACAC GATGCCTTAC ACGGAAGGCG TGATCGGTGC GGATCTCTCC
GACCAGGTGC ATATCAGGGA CCTGATGCTC ACCCGGCAGG TGACGTTGAG CGATGTGTTT
ACAGCCGTGC AGGGGGTCCG GGCGATGGCC CTGCACGTTC CGATCCGTCA CAAGGGAGAA
TTTCGGGGCA GTATCGGAAT CTTTATCCCG TACGAGAAGC TCACCAAGGA ATACCTGGCC
CCCATCCAGA TTGGCGCGAA CGGGCATGCG TGGATCATCA GCCGAAACGG GACCGAGCTT
TATTCGCCGG TGGCGGGACG CACGGGCAGT TCGGTTTTCG AGGCTTCCTC CCGTTTTCCT
TCCGTCATTT CCATGGTCGA GAAGATGCTC AAGGGTGAAG AGGGCGTGAC CACGTACAGC
GACGAGATCG TCGAGAACGG CAGAACCGAA GTCATCACAA GACACGCGGT ATTCCTTCCG
GTGCATATGG CGAACACCTT CTGGTCGATT GTGGTGTCCA CGCCCGAGGA CGAGGTTCTG
GCCCTCATGA AAGGTTTCCG GAACCGCTGG CTTCTCATGG TTGTCATACT GATGGCCGCC
AGCCTGATCT ACGCCTATTC CATGGCGAAG GCATGGGCGA TCATCCGGGA AGAAAACAGG
CGGGAACAGA CAGAAAAGAC GTTGCGGGGA ACCAATCAGT TGCTCAACGC CCTGATCGAA
TCATCGCCCC TGGGCATCAA CATCACCGCT CCGGATGGAA CGGTAAAACT TTGGAACCCG
GCCTCCGAGC GGATATTCGG ATGGAGCCGG GAGGAGATCG TCGACAAGCC TCTGCCCACT
CTCACTCCGG AGATCGAAGC CGAATTCAAC ACTTACTTCA CCGCCTTGTT GCAGGGGCAG
GCCTACACAG CATTGGAGAC GCGCCGTAAG AGGAAGGACG GAACGGTGAT CGATGTCAAT
CTGTCGGGGG CGCCGGTCCG CGATGACACG GGCAGAATCA TAGGGGGCAT GGGGATTATC
GAAGACATTA CCGGCAGGAA AAAGACGGAG GAGGAGCGCG TTCGCCTGGC TTCCGCGGTG
GAACAGGCCG CGGAAGTGAT CTTCATCACG GATCATGAGG GGACGATTCA GTACGTCAAC
CCGGCTTTCG AGAGAATCAC CGGGTATGAA AAGGGGGAAG CGCTCCACCG GAACGTCCGC
ATCCTTGCCA GCGGCAAACA CAGCAAGGAT TTCTACCAAC AGGTTGATCA CACCCTTGCG
CGAGGTGAGA CCTGGGCCGG GCGCTTTATC AACAGGAAGA AGAACGGCTC GCTCTTCGAG
GTCGAGGCAA CCATTTCCCC GGTGCGGGAC GCTTCGGGCA AAATCACCAA CCACGTCGCC
GTGCAGCGCG ACGTGACACA GGAAGTCGGC CTGGAGCGGC AACTGAGGCA GGCCCAAAAA
ATGGAGGCGA TAGGCACTCT GGCCGGAGGG ATCGCCCACG ACTTCAACAA CATCCTCGGA
ATCATCCTGG GCTACACGGA AATGGGCATG CTCAAGATCG ACAACCGCGA CATCGCCGAG
AAAAGCCTTG CGGAAGTCCT GAAGGCAGGG CATCGCGCAA AGGAGCTGGT GAGGCAGATC
CTCGCTTTCA GCCGTCACAG CGAATACGAG CTGAGGCCCG TGCAGGCGAG CCTTATTGTC
AAGGAAGCCC TGCGGCTTCT CCGGTCGTCC CTGCCCAGCA CCATCGAGAT CAGTCGCAAT
ATTTCGAACA CGGGGGTGGT CATCGCGGAT CCGTCTCAAA TCCACCAGAT TGTCATGAAT
CTTTGCACCA ACGCACATCA TGCCATGCGG GAAAAAGGAG GCGTGCTCTC CGTAACCATG
GAGGACACCG AGCTCGATGA GAGTGCCGTT GCCCAGTGCG GGGGAGTCAC CCCCGGACCC
TATTTGAGAT TGACCGTGAG AGACACGGGA CAAGGGATGG ACGCATCCAT TATGGAACGC
ATCTTCGACC CCTATTTCAC CACCAAGGAC CAGGGGGAGG GAACCGGCCT CGGACTTGCC
GTGGTCCACG GCATCGTCAA GAACCTGGGG GGAGTGATCG CCGTGGAGAG CGAGCTCGGA
AAGGGCAGCG CTTTCCATGT GTTCCTTCCC AGGACCGAGC GCCGCCAGTC CGTGACTGAA
CGGCCCGCCG GCAAATCCCC TTCCGGCAGG GAGCGAATCC TTTTCGTGGA CGACGAGGTG
GAGTTGGCCA GAGTGGCTGA CAAAATGCTC ACCCACCTCG GCTACACGGT GAGCTCCCAT
ACCAGCAGCA CGGATGCTCT CGAGGACTTT CTCGAGCGGC CGGACCAGTT CGACCTCATC
ATCACCGACC ACACCATGCC GAACCTCACC GGCATCGACC TGGCCAGGGA ATGCCTGCGC
ATCAGGCCCG ACATGCCGAT CATCATCTGC ACGGGCTTCA GTGAACGGCT GAACGAGGAT
GTCGCAAAGG CCGCGGGCAT CCGGCAGTTT GTCATGAAAC CTCTGGTGAT CGACGACCTG
GCAAGGATCG TTCGCAAAGT GCTGGACAGA CGCTGA
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| Protein sequence | MFLHSKHLEN LCVFRFTPII RCKHIPRNEP FLNTVLDSDM KIIGRFIVFV ILVGLTGYVL
YSAYSEVETK TIDQLNAQQM THARQAARGI EDYFESKLNM LAFLSKSEHI INLDEEGRQI
LALLYYEHSE SMSAITRVDA DGRIMYTMPY TEGVIGADLS DQVHIRDLML TRQVTLSDVF
TAVQGVRAMA LHVPIRHKGE FRGSIGIFIP YEKLTKEYLA PIQIGANGHA WIISRNGTEL
YSPVAGRTGS SVFEASSRFP SVISMVEKML KGEEGVTTYS DEIVENGRTE VITRHAVFLP
VHMANTFWSI VVSTPEDEVL ALMKGFRNRW LLMVVILMAA SLIYAYSMAK AWAIIREENR
REQTEKTLRG TNQLLNALIE SSPLGINITA PDGTVKLWNP ASERIFGWSR EEIVDKPLPT
LTPEIEAEFN TYFTALLQGQ AYTALETRRK RKDGTVIDVN LSGAPVRDDT GRIIGGMGII
EDITGRKKTE EERVRLASAV EQAAEVIFIT DHEGTIQYVN PAFERITGYE KGEALHRNVR
ILASGKHSKD FYQQVDHTLA RGETWAGRFI NRKKNGSLFE VEATISPVRD ASGKITNHVA
VQRDVTQEVG LERQLRQAQK MEAIGTLAGG IAHDFNNILG IILGYTEMGM LKIDNRDIAE
KSLAEVLKAG HRAKELVRQI LAFSRHSEYE LRPVQASLIV KEALRLLRSS LPSTIEISRN
ISNTGVVIAD PSQIHQIVMN LCTNAHHAMR EKGGVLSVTM EDTELDESAV AQCGGVTPGP
YLRLTVRDTG QGMDASIMER IFDPYFTTKD QGEGTGLGLA VVHGIVKNLG GVIAVESELG
KGSAFHVFLP RTERRQSVTE RPAGKSPSGR ERILFVDDEV ELARVADKML THLGYTVSSH
TSSTDALEDF LERPDQFDLI ITDHTMPNLT GIDLARECLR IRPDMPIIIC TGFSERLNED
VAKAAGIRQF VMKPLVIDDL ARIVRKVLDR R
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