| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2400 |
|---|
| Symbol | |
|---|
| ID | 4459318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2963613 |
|---|
| End bp | 2964536 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639703165 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_846516 |
|---|
| Protein GI | 116749829 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA AGGACAAGAC CAGAGCGGCA ACTTTGTCGG TATTGTCGAA TACGGCCCTG
ACGGTGTTGA AGCTGGTTGT GGGGATCATG ACGCAATCGG TGGGCGTCAT TGCGGAAGCG
GTGCATTCGG GTCTCGATCT TCTCGCCGCC GTCATCGCCT GGTTTTCGGT CAGGGCATCC
GGGAAGCCGG CGGACGACAG GCATCGTTAC GGGCACGGCC AAATCGAGAG CGTTTCGGGC
GTGGTCGAGG CTCTGCTGAT CTTTGCAGCC GCGGGCTGCA TCATCTTTGA AGCCTTGGAG
AAACTGTGGA GCGATCATGT GGAAATCGAA ACCCCGGGGC TGGGGGCCGC GGTCATGGCC
GTTTCGGCCA TCGTCAACTA TTTCGTGTCC CGACACTTGT ACGATGTGGC CGAAGCGACC
GACTCCCTGG CTCTGAAGGC CGACGCGCTC CACCTGAGAA CGGATGTCTT CACCTCCGTG
GGCGTGTTTG CGGGGTTGGT CGCGATCGAA ATCACCGGCA TGAACATACT GGATCCTTTG
GCGGCGCTGC TGGTGGCCGT GCTCATTTTG AAGGCGGCCT ATGACCTGGT CGGGAACGCC
GTCCTGAACA TACTCGAGGT GCGGTTGCCG GATCACGAGG AAGAAATCAT AATGGCCGCC
CTGGACGAAA ACTCCAACAG GTTCGTGGAA TTCCACAAGC TCAGAACGCG CAAGTCCGGC
AGCACCCGGC ACATTGACAT GCACCTGGTG GTATCGCGGA TGACGTCGGT GGAGGAAGGG
CACCGGTTGA GCCACTTGGT CGCCGGGAGC ATCCGGGAAA GGCTGCCCAA CTGCGAGGTG
CTGGTACACA TTGAACCGTG TGGGAGCCGG TGTGAAGAGT GTCGGGCAGA CTGTCCGACG
GCGAGCGTGT CGCCTTGGCG GTGA
|
|---|
| Protein sequence | MTQKDKTRAA TLSVLSNTAL TVLKLVVGIM TQSVGVIAEA VHSGLDLLAA VIAWFSVRAS
GKPADDRHRY GHGQIESVSG VVEALLIFAA AGCIIFEALE KLWSDHVEIE TPGLGAAVMA
VSAIVNYFVS RHLYDVAEAT DSLALKADAL HLRTDVFTSV GVFAGLVAIE ITGMNILDPL
AALLVAVLIL KAAYDLVGNA VLNILEVRLP DHEEEIIMAA LDENSNRFVE FHKLRTRKSG
STRHIDMHLV VSRMTSVEEG HRLSHLVAGS IRERLPNCEV LVHIEPCGSR CEECRADCPT
ASVSPWR
|
|---|
| |