| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2340 |
|---|
| Symbol | |
|---|
| ID | 4459361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2875263 |
|---|
| End bp | 2875778 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639703105 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_846456 |
|---|
| Protein GI | 116749769 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0726108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC GACCAGGTGC CGTGACGATG AAAGGCGCCC CCCTCACCTT GGTGGGCAAG
GAAATCAAGC CGGGCGACAG AGCGCCCGAT TTTGAAGTTC TGGACAATGG CCTGGCCCCT
GTGCGGCTTG GAGCTTACCA GGGCAAAGTG ATCGTCCTCT CTTCGGTGCC TTCTCTCGAT
ACCCCCGTTT GCGATATGGA AACCCGCAGA TTCAACTCCG AAGCAGCCAA GCTCGGCGAC
GAGGTGGTCG TGCTCACGGT GAGCATGGAT CTGCCTTTTG CACAGAAGCG CTGGTGTGGC
GCGGCCGGGG TGGAACAGGT CACAACCCTC TCGGACCACA AGGACGCCTC ATTCGGACTG
GCCTACGGCG TATTGATCAA GGAACTGCGT CTGCTTGCCA GGAGCGTCTT CGTGATCGAT
CGCCAGGGTG TCGTCCGCTA TGTCCAGCTG GTAAAGGAAA TTACCCACGA ACCCGACTAT
GATGATGTTC TTCAGGCCAT CGCCAAAGCC AGGTGA
|
|---|
| Protein sequence | MTERPGAVTM KGAPLTLVGK EIKPGDRAPD FEVLDNGLAP VRLGAYQGKV IVLSSVPSLD
TPVCDMETRR FNSEAAKLGD EVVVLTVSMD LPFAQKRWCG AAGVEQVTTL SDHKDASFGL
AYGVLIKELR LLARSVFVID RQGVVRYVQL VKEITHEPDY DDVLQAIAKA R
|
|---|
| |