Gene Sfum_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2331 
Symbol 
ID4459387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2864610 
End bp2865407 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content62% 
IMG OID639703096 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_846447 
Protein GI116749760 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.231658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGA AAGTCGCCAC GTTCAACGTC AACGGCATAA GGTCCCGCAT GGCGCCGGTG 
CTGGAGTGGC TCGACCGCCA CCGGCCGGAT GCCCTGTGCC TGCAGGAGTT GAAATGCCAA
AACGCCGATT TCCCCCTGGA CGCCTTCAGG AAAGCAGGCT ATTTCGCCGC CTTCAGGGGT
CAGAAGGCCT TCAACGGGGT GGCGGTCCTG AGCAGATCGG AACCCTCCGA AGTCCTGCTC
GAATTCGGAG ACGGAAAGCC CGACGAGGAA GCCCGACTGA TCGCCGTGAA ACTGAACGGA
ATATGGATCG TGAACACCTA CGTGCCGCAG GGGCGCAGCC CTGAAGAGCC CGCCTTCGAG
TACAAACTGG ACTTCTTCGG CCGACTGAAA TCCTGGCTTG ACGGCCGCTT CGAGCCTTCG
CAGCCGCTGG TGTGGACGGG AGACATCAAC GTCGCCCCTG AAGCCATCGA CCTTTTCGAC
CCCAAGAGGC TGGCGGGCAA GGTCAGTTTC CACCCGAGGG AACACGAAGC CCTTGCGGCG
GTGGCCGCGT GGGGACTGGT CGACGTTTTC AGGAAACTCC ACCCCGACAC CAAGCAATTC
ACCTTCTGGG ATTATCGGCT GCCGCAAAGC TTCAAGAGAA ACCTCGGGTG GCGCCTGGAC
CACATCTACG CCACCCGCAC CCTCGCCGAT GCCTGCCTGG AATGCCAGGC CGACGGCGAG
CCGCGCGGCC GCGAGACCCC AAGCGATCAC ACTCCGGTCT GGGCCGAGTT CGATCTCGAA
AGACTGGGAG CCGAATGA
 
Protein sequence
MAWKVATFNV NGIRSRMAPV LEWLDRHRPD ALCLQELKCQ NADFPLDAFR KAGYFAAFRG 
QKAFNGVAVL SRSEPSEVLL EFGDGKPDEE ARLIAVKLNG IWIVNTYVPQ GRSPEEPAFE
YKLDFFGRLK SWLDGRFEPS QPLVWTGDIN VAPEAIDLFD PKRLAGKVSF HPREHEALAA
VAAWGLVDVF RKLHPDTKQF TFWDYRLPQS FKRNLGWRLD HIYATRTLAD ACLECQADGE
PRGRETPSDH TPVWAEFDLE RLGAE