Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2304 |
Symbol | |
ID | 4459395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2829805 |
End bp | 2832417 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703070 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_846421 |
Protein GI | 116749734 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCC GAAGTCTGCG TTTCAAAATC AGTGCGGCTA TTCTGGGGAC TTCCGCCCTG ATCGCCGTCC TTTCCTTTGC GATTCTCTAT CCTTTCGAGA TGAGCCGCCA CGCCGCCTAT GAAAAAAAGA TTTTTCTGCT GCTGGACACC GTGTTCCATC AAAAGCGCGA AGACCTCGCC AATGAGCTGT TCGCCGGGCA GAAGAAGGCG CTCGCGGCGT CGCTGCAGGA CATGCTGAAG GTCGAAGGAA TTGTCGGAAT AACGGTGTGC CTTCCGGACG GCCAGGTTTT CCTGGCCACG GAGGACGCTT TCGCCGTTCC CATGAAAGGC TCGGAACGTC GGGCCCTCTC CGAATCGTCC ACTCTGCTGC CCAGGTACCG CACCCCCCGG TTCCCCTCAC TGGGAGTCTA CACACGACAG ATTGGGGTCA TCGGAATGCC GGTGGGGTAC ATACGGCTCT ACTACGACGT TTCAGGGCTG GAGAGAGAAA CCCAGTCCTT CGTCATGATC TTCGTGGTGT TGCTGGTGAC GATCCTGGTC CTCATGTCGG GCCTTCTCAA CTTCCTGCTC ACGCGCTTCG TCACAAGGCC CATGTCGCTG CTTCGCGAAG CGATCCTCAA GCTCCAGAAG GGACACCTGG GCGAGACGGT GCACCTGCCT TCGGGCGATG AAATCGGCGA CGTGGGGCGT GTCTTCAACG AAATGTCGGT GGACCTCGAG AGAAGCCAGG TGGCGCTCCA GCAGGCGGAG GAGAAGTACC GCGGCATCTT CGAGAATGCA ACGGAAGCCA TCTTTCAACG TACCCCCGGC AAGGGCCATT TCCTGACGGT GAATCCTTCC ATGGTCCGAA TGCTGGGATA TGCCTCCGAG AAGGAACTGC TGACCAGCGT GACCGATATC GGCCGGCAGC TCTACGTCAG ACCGAAGGAC CACGAGGAAT TCGAGCGCGT GTTGGCCGAG CAGGGGCGCA TCGTCGGGTT CGAGACCGAG CTGTATCGCA AGGACCGCAG CACCGTGTGG GTGTCCGCTT CGGCCCGAAG AGTGCCCGGG ACGAGCGGTG GAGGTTATTA TTATGAAGGG CTGCTGGTCG ACGTCACGGA ACGCAGGGAA AAGGAGAAGG CCGAACGGGC AAAGGACACG GCCGAGGCCG CCAGCAAGGC AAAGAGCGAG TTCCTGGCGA ACATGAGCCA TGAAATCAGG ACGCCGATGA ATGCCATTCT CGGTTTCACG TCGCTCCTCA GCCCTCTGAT CACCGACCCG CGCCAGAAGA ACTATCTTCA ATCGATCCAG TCGAGCGGGA AAAATCTGAT GTCGCTCATC AACGATATCC TCGACCTGTC GAAAATCGAG GCGGGGAAGA TGGAAATCCA ATATGAACCC GTGGTGCTCC GCTCCGTCTT TGTCGATCTG GAGAAGGTCT TTTCCTGGAT CATACAGGAC AAGGGTCTGC AGTTCATCAC GTCCATCGCC TCCGATGTTC CGGAATGCGT GCTCCTGGAC GAGGTGCGGT TGAGGCAGAT CCTCTTCAAC CTGGTGGGAA ACGCTCTGCG GTTCACCGAA AGCGGCTGGA TCAGGCTTTC GGCCTGGAGG GAAGCGGGGG CGGGCGATGG GAGCTTCTGC CTGGTGATGG TTGTCGAGGA CACGGGAATG GGGATCCAGC CGGAGGCTCA CAACCGGATA TTCGAGTCGT TTCGACAGCA ATCCGGGCAG AGAGCGCGCG TGTATGGCGG CACGGGGCTG GGCCTCACCA TCTCCAAGAG CCTGGTGGAA ATGCTCGGGG GAACGATCTC CGTGCAAAGT CGCCCCGGTG CCGGAAGCGT ATTCGAAATC CGTCTTCCGG ATGTGTCTGA GGCGGCCGAG ACTGACCGGG CCGAACAGGC CGAAACGTCC GATGTCGATT CGATCCTGCT GGACAAGGCA AAGGTGCTCG TGGTGGACGA CCTCGACCTC AACCGCAAAC TCGTGAAGGA ATTCCTGCAG AACACCCGGG TCGAAGTCAT CGAGGCGGAC AATGGGCAAA CGGCTCTGCA GGCCGCCGAG ACCGCGAACC CCGACCTCAT CCTGATGGAC ATCAGGATGC CCGGGATGGA CGGCTATCAG GCGCTGCGGC GACTCCGCAG AAATCCCGGA ACAAGGCGCA TTCCCGTTGT CGCTCTGACG GCCTCGGGCA TGAAGGAAGA GATCGAGCGC CTCGAGAGGA GCGGGTTCGA CGGGTGGCTG GTCAGGCCTT TCAGCAAGCC GGAACTCCTT AAGGAACTGC ACCAGTTCAT CCATGATCGG AAAGCGCGGA CGATTCCGGC GAAACGTCCC CAGGCTTCCG GCCTCGCATC CGCGGATTCC GTCTCGTCGC TGCCGGAACA TGTCAGGGAT GAAATCGTCG CTTTTCTGGA GAATGAGCTG ATGGATCGCT GGGAGATCGT CAGCCGCAAG CAGCACATCT CGGAAATCGA AGACTTCGGC TGCCGCATCA AGGCGCTGGG CGACCGCTAC GGAGTGAGCT ATCTTTCGAC ATATGCCGAC AATCTGTTGT TTCATACGGC CGGTTTCGAC GTTGAAAACA TCCGCCGGGC GCTCGACGCG TATCCCGAGT TCGTGGCCGG CGTCAGGAAG TGA
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Protein sequence | MKIRSLRFKI SAAILGTSAL IAVLSFAILY PFEMSRHAAY EKKIFLLLDT VFHQKREDLA NELFAGQKKA LAASLQDMLK VEGIVGITVC LPDGQVFLAT EDAFAVPMKG SERRALSESS TLLPRYRTPR FPSLGVYTRQ IGVIGMPVGY IRLYYDVSGL ERETQSFVMI FVVLLVTILV LMSGLLNFLL TRFVTRPMSL LREAILKLQK GHLGETVHLP SGDEIGDVGR VFNEMSVDLE RSQVALQQAE EKYRGIFENA TEAIFQRTPG KGHFLTVNPS MVRMLGYASE KELLTSVTDI GRQLYVRPKD HEEFERVLAE QGRIVGFETE LYRKDRSTVW VSASARRVPG TSGGGYYYEG LLVDVTERRE KEKAERAKDT AEAASKAKSE FLANMSHEIR TPMNAILGFT SLLSPLITDP RQKNYLQSIQ SSGKNLMSLI NDILDLSKIE AGKMEIQYEP VVLRSVFVDL EKVFSWIIQD KGLQFITSIA SDVPECVLLD EVRLRQILFN LVGNALRFTE SGWIRLSAWR EAGAGDGSFC LVMVVEDTGM GIQPEAHNRI FESFRQQSGQ RARVYGGTGL GLTISKSLVE MLGGTISVQS RPGAGSVFEI RLPDVSEAAE TDRAEQAETS DVDSILLDKA KVLVVDDLDL NRKLVKEFLQ NTRVEVIEAD NGQTALQAAE TANPDLILMD IRMPGMDGYQ ALRRLRRNPG TRRIPVVALT ASGMKEEIER LERSGFDGWL VRPFSKPELL KELHQFIHDR KARTIPAKRP QASGLASADS VSSLPEHVRD EIVAFLENEL MDRWEIVSRK QHISEIEDFG CRIKALGDRY GVSYLSTYAD NLLFHTAGFD VENIRRALDA YPEFVAGVRK
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