Gene Sfum_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2303 
Symbol 
ID4459394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2829098 
End bp2829781 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content55% 
IMG OID639703069 
Productresponse regulator receiver protein 
Protein accessionYP_846420 
Protein GI116749733 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGGA TCCACAACGG GCAGTGCAAC ATTCTGATCG TGGATGATAT TTCCAAGAAT 
ATTCAAGTAC TCGGGAATAT TCTGCGCCGG GACGGCTATT CCCTTTCCTT TGCCACCAGC
GGCACGCAGG CGCTCGATAT GGTCTTTGCC GACGACTACG ATCTCATTCT TCTTGATGTG
ATGATGCCGG AGATGGATGG CTTCGAGGTC TGCCGCAAAA TCCGCGAGCT TCCGGACGGT
CAGGCCATTC CGATCATCTT CCTGACCGCC AAGACCGATG AGGAGGACAT CGTCAAGGGG
TTTCAGGCCG GGGGGACCGA CTATGTGACA AAGCCTTTCA ATTCCGAGGA GCTGCTGGCT
CGAGTGCATG CGCATCTCGA ACTGAAAAGG GCGAGGGACG AAATCCAGCT GGCTTATCAG
GAGCTTGCTG AAAGGACCAA CGACCTGATC GTCCTCAACG AGGAGCTGCA GAATGCGCTG
AGAGAAATCA AGACGTTGCG GGGGTTTCTT CCCATCTGCG CCAATTGCAA GAAGATTCGC
AAGAAAGATG CGCCCTACGA CAGGCAGGAT TCCTGGGTGG ACATTGAGAG TTACGTGAAA
GACCACACCG AGGCGGAGTT CACGCATTCC ATCTGTCCGG AGTGCATGCG GCTGCTCTAC
CCCGATTTTG TCCGCAAGCC CTGA
 
Protein sequence
MSRIHNGQCN ILIVDDISKN IQVLGNILRR DGYSLSFATS GTQALDMVFA DDYDLILLDV 
MMPEMDGFEV CRKIRELPDG QAIPIIFLTA KTDEEDIVKG FQAGGTDYVT KPFNSEELLA
RVHAHLELKR ARDEIQLAYQ ELAERTNDLI VLNEELQNAL REIKTLRGFL PICANCKKIR
KKDAPYDRQD SWVDIESYVK DHTEAEFTHS ICPECMRLLY PDFVRKP