| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2287 |
|---|
| Symbol | |
|---|
| ID | 4459413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2808175 |
|---|
| End bp | 2810004 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639703053 |
|---|
| Product | aldehyde ferredoxin oxidoreductase |
|---|
| Protein accession | YP_846404 |
|---|
| Protein GI | 116749717 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAT GGATGGGGAA GATCCTGCGC GTGGATTTGA CCCGGGGCGA AGTACGGGAT
GAGGCACTGG AAGCCCGGAT CGCCAAGGAT TATATCGGTG GGAGAGGCCT CGGCATCGAG
ACGTTGCTCC GGGAAGTGGA CCCGAAATGC GATCCGCTGT CCCCCGAAAA CAAACTGGTG
ATGGCCAACG GGCCGCTCAC GGGCACCAAG GCTCCGACCG GGGCGCGGTA CATGGTCATG
ACCAAGTCGC CTCTGACCGG TTCGGTCACC TGTTCGAATT CGGGCGGATA TTTCCCGGCG
GAGTTGAAGA AGGCCGGCGT GGATATGATC GTCTTCGAGG GACGGGCGTC CGAACCGGTT
TATCTTTACA TCGAAGGGGA ACGCGCGGAG TTGCGTTCCG CGGCGCACCT TTGGGGAAGG
ACAACCCACG AGACGGACGC CGCAATCCGT CGGGAGACCG TTCGAGGGAC ACGTGTGGCC
TGCATCGGAC CGGCGGGAGA GCGGGGCGTG CTGTTTGCCT CGATCATGAA CGACCGGGAC
CGGGCGGCCG GCCGTTCCGG GGTCGGGGCG GTCATGGGGG CCAAGAATCT GAAGGCCGTG
GCCGTGCGAG GGGACAAGGA AGTCGTGCTG CACGATGCCA GGGCATTCGC TGAAATCGTC
AGGAAAATCA TCAAGCGGTT CCGGGATTCC CTCAAGGGCG GCAAGCACCC GCTCAACCTG
CACGGGACCG CGGTCACGGT CATGGCCACG CAGAATTTCG GCGTTTTTCC CACCCGGAAT
TTCCAGCAGG GAACGTTCGA CGCGTGGGAG GAGATCCACG GCGAAAGCCT CACGCGAAAG
TTCCTGGTCC GACCCAAGGC CTGTTTCAAT TGCCCCATCG GGTGCGGCCG GGTCACCAAG
GTGGACGAAC CCGGTTTCCA GGGGACGGGG GAAGGCCCGG AATACGAGAC GGTGTACGCC
ATGGGAAGCA ACTGCGGGGT GAGCAACCTG GCGGCGGTGA CCAAGGCCAA CTATATTTGC
AACGAGATGG GAATGGACAC CATCTCCATG GGAGCCACCA TCGCCTGCGC CATGGAACTT
GCGGAGCGCG GGTTCCTGCC GGAGGCCGAC GTGGGAGGAC CGCTGCGTTT CGGAGACGCT
CGCGCTCTAG TGGAGCTTAC CCTCAAGACG GCATCGCGCG AAGGCTTCGG GGATCTGCTG
GCCCGGGGCA GCTATCGCCT CGCCGAGCAC TACGGGCACC CCGAACTGGC CATGGTCAGC
AAGAAACAGG AATTTGCGGG CTACGATCCC AGGGGTGCGC AGGGCATGGG ACTGGCCTAC
GCCACCTCTC CCGTGGGTGC TTCGCACATG CGCGGGGATT CGGCCTATAT CGAGCTTCTC
GGGGTTCCCA TGGTGCTCGA TCCGCTCAGT TGGGAGGACA AGTCGGAGCT TGTGAAGGAT
TGGCAGGACG TGTTCACCGT CATCGATGCG GCGGGGCTCT GTGTCTTTTT TTCGGTGAGG
AACCTGGTGA CGCCCACTCG CGATATCCGG CCCCAGGGCA TCATGGAGCT CCTGAACGCG
GCAACCGGGG CGGACTACGG CCTGGATGAG CTGGTTCGGG CCGGAGAGCG GATTTTCAAC
GCCGAACGAT TGTTCATGAT CCACGCCGGG CTGTCGTGCA AGGATGATTC GCTGCCGCCG
CGGATGACCG GCGAGCCGCT TCCCGACGGT CCGGCTCGAG GCAGTGTCTG CCGCCTGCCG
GAAATGCTCC GGTCCTATTA TCAGCTGCGC GGGTGGGATG AGAACGGCAT ACCGACCTGG
ACGAAACTCA GGGAACTGGG ACTCGTCTGA
|
|---|
| Protein sequence | MNGWMGKILR VDLTRGEVRD EALEARIAKD YIGGRGLGIE TLLREVDPKC DPLSPENKLV
MANGPLTGTK APTGARYMVM TKSPLTGSVT CSNSGGYFPA ELKKAGVDMI VFEGRASEPV
YLYIEGERAE LRSAAHLWGR TTHETDAAIR RETVRGTRVA CIGPAGERGV LFASIMNDRD
RAAGRSGVGA VMGAKNLKAV AVRGDKEVVL HDARAFAEIV RKIIKRFRDS LKGGKHPLNL
HGTAVTVMAT QNFGVFPTRN FQQGTFDAWE EIHGESLTRK FLVRPKACFN CPIGCGRVTK
VDEPGFQGTG EGPEYETVYA MGSNCGVSNL AAVTKANYIC NEMGMDTISM GATIACAMEL
AERGFLPEAD VGGPLRFGDA RALVELTLKT ASREGFGDLL ARGSYRLAEH YGHPELAMVS
KKQEFAGYDP RGAQGMGLAY ATSPVGASHM RGDSAYIELL GVPMVLDPLS WEDKSELVKD
WQDVFTVIDA AGLCVFFSVR NLVTPTRDIR PQGIMELLNA ATGADYGLDE LVRAGERIFN
AERLFMIHAG LSCKDDSLPP RMTGEPLPDG PARGSVCRLP EMLRSYYQLR GWDENGIPTW
TKLRELGLV
|
|---|
| |