Gene Sfum_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2284 
Symbol 
ID4459410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2805215 
End bp2806072 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content60% 
IMG OID639703050 
Productinner-membrane translocator 
Protein accessionYP_846401 
Protein GI116749714 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCTC TAGCCGTCAT GAACGGCCTG GTGATCGGGG TCATCTATGC CCTGGCCGCG 
CTGGGGGTAT CCCTGGTGGT CGGTATCATG AACGTGGTCA ACTTCGCCCA CGGGGAGCTC
TACATTCTGG CCGGTTATTT CAGTTACCTG TTTGCCGGGG CGCTCGGAGT GAATTTCGTG
GCGGCGATGA TCGTTGCCGT GCTGCTGGTG TTTCTCTTCG GCCTTTTTGT GGAATGGGTG
CTCATCCGTC CGACCTATGG CAACGACATG TATTCGCTCA TCCTCACGTT CATTCTCTCT
ATCGTGTTGC AAAACGCCTA CCTGCTCATT TTCGGACCCT ACCCGAACAA ACCGCCCGGA
TGGGTCGGCG GCGCAACCAA CGTTTTCGGG CTGTTCTACT ACGGCAATCA GCGACTGGCC
GCGCTGGCGG CCGCAAGTGT GGTGATCGCG CTGCTCTTCG TGGTGATCAA GAAGACCTGG
TTCGGGCGGA TCATCAGGGC CACGAGCCAG GACCGTGAGA TGGCGGAGCT CAACGGGGTG
AACACCACGC GCCTGAATAT GCTGAGCTTC GGGCTCGGCT GTGCCCTGGC GGCGGCGGCG
GGGGTGATCC TGGCTCCCGT GTTTCCGGTC ACTCCAACCG CCGGGTTGCC CGTGGCGCTC
ACCGCCTTTG TCGTCGTGGT TCTCGGCGGC ATGGGATCAC TCTGGGGGTG CGTCCTGGGA
GGCCTGATTC TCGGCCTGGT GGAGAACCTC GGGGCGGCCT TCATTTCCAC CGGGTACAAG
CACCTTTTTA ATTTCATCAT CCTGATTCTT GTGCTCCTCA TCAGGCCGGC GGGTCTTTTC
GGCCGAAGGG AAGCCTAG
 
Protein sequence
MFALAVMNGL VIGVIYALAA LGVSLVVGIM NVVNFAHGEL YILAGYFSYL FAGALGVNFV 
AAMIVAVLLV FLFGLFVEWV LIRPTYGNDM YSLILTFILS IVLQNAYLLI FGPYPNKPPG
WVGGATNVFG LFYYGNQRLA ALAAASVVIA LLFVVIKKTW FGRIIRATSQ DREMAELNGV
NTTRLNMLSF GLGCALAAAA GVILAPVFPV TPTAGLPVAL TAFVVVVLGG MGSLWGCVLG
GLILGLVENL GAAFISTGYK HLFNFIILIL VLLIRPAGLF GRREA