Gene Sfum_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2283 
Symbol 
ID4459409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2804234 
End bp2805190 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content63% 
IMG OID639703049 
Productinner-membrane translocator 
Protein accessionYP_846400 
Protein GI116749713 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACA AACGCTTCTA CCAGGTCCTT GTCCCGGCTG TCGTGCTGTT CGGCTTCCTG 
CCGTTCGGCC TCGGCTCCTA TCACCTGCAC GTGGTGATCG TCAGCCTGTT CTACCTGATG
ATGGCATCGA GCTGGAACCT GCTGGCCGGG TACACGGGCC AGGTTTCCTT CGCCCATGCG
GCTTTTGCGG GGATCGGCGC CTACACGTCG GGGATTCTGG CCGTCAGGTT CGGACTGAAC
CCCTGGATCG GCGTGGTCGT CGGCACGATG CTGGCCGCGC TGCTCGGCCT GGCGGTCGGC
GTTCTTTGCC TGAGGATGGG GGGCATCTAC CTGTCCCTCA CGACGCTGGG CTTTTCCGAA
ATCCTGCGGA TCATCATCAC CAACGAATAC GAGGTGACCC GCGGCACCAT GGGGCTCCAG
GTGCCCGGCC TGTTCGCGGA GTATTCCAAG GTCGGCTATT TCTACGTCAT GCTGGGGGCG
GCGGTGCTGA CCCTGATCAT CATATACCGA CTGATCCATT CCAACATCGG ACTGAATTTC
CGCGCCGTGC AGAATGATGA GCGGGCGGCC GCCTCGCTCG GAGTCGACGT GGTCAGGGTG
CGCGTGCTCG CCTTCACGGT CTCCAGCGCC CTTGCGGGCA TGGCGGGCGG GCTCTACGGG
CACTACCTGC TCCTGATCAC GCCGGAAATC CCGTCGCTCG ATCAGCAGTT CCTGGTGCTG
TCCATGACGG TGATCGGCGG CATGGGGTCT TTTCCGGGGC CGATCATCGG GGCTTTTTCC
CTGGAGATCC TGTCCGAATA CATTCGTGCG TACGGGGAAT ATCACGTCCT GGTGTTTGGC
CTGATCGCCC TGGTGGCGGC CCGGTTCGCC CCCAACGGCC TGATGGGGCT GGCGAAAGAT
CGGCTGGTGC GCCGGCGTGC GCCTGCAAAG ACGGTCGCCG CGGCGGCGAA ATCTTAG
 
Protein sequence
MTDKRFYQVL VPAVVLFGFL PFGLGSYHLH VVIVSLFYLM MASSWNLLAG YTGQVSFAHA 
AFAGIGAYTS GILAVRFGLN PWIGVVVGTM LAALLGLAVG VLCLRMGGIY LSLTTLGFSE
ILRIIITNEY EVTRGTMGLQ VPGLFAEYSK VGYFYVMLGA AVLTLIIIYR LIHSNIGLNF
RAVQNDERAA ASLGVDVVRV RVLAFTVSSA LAGMAGGLYG HYLLLITPEI PSLDQQFLVL
SMTVIGGMGS FPGPIIGAFS LEILSEYIRA YGEYHVLVFG LIALVAARFA PNGLMGLAKD
RLVRRRAPAK TVAAAAKS