Gene Sfum_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2262 
Symbol 
ID4459458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2785080 
End bp2785964 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID639703028 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_846379 
Protein GI116749692 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA TCCTGATCAT CGGCCATAGG GGCATGCTCG GCACCGACCT CACGGAGAGA 
CTCCGGTCGC AGGGCTTCGC GGTGGAAGGG GTGGACCGGG ACGAATTGGA CATCGCCGTG
CCGGAGGAGG TTCTCCGCTG CCTGGAGACC ATCCGGCCCC GCCTGGTCAT CAACTGCGCC
GCCTACACGG CGGTGGACCG GGCCGAGGGC GAACCCGGAG CCGCGTTCGC CGTCAACCGC
GACGGGCCGG CTCACATCGC CGCCGCCTGC GGGCGGCTCA ATAGCCCGCT CATTCACATT
TCCACCGATT ACGTCTTCGA CGGCCGTGCG TCGGCGCCAT ACAAGGAGGA TGATCCGGTC
AATCCCGTGA GCGTGTACGG GCGGAGCAAA TGGGAGGGGG AGGCGGCGGT CCGGTCCCGG
CTGCAAAACC ATCTCATCGT CCGCACGGCC TGGTTGTTCG GGGCGAACGG CAACAGCTTC
GTGAAGACGA TCCTCAGGCT TGCCGCGGAA CGGGCGGAGC TGCGCATCGT TTCCGACCAG
TACGGATGTC CCACCTGGAC GGGAGACCTG GCGTCGGCTT TGACCGGTTT GAGCAAACGA
GTCCTGGACG GTGCCCGTAC CGTTCCCTGG GGAACCTATC ATTACTGCGG CAAGGGCGCC
GTTTCGTGGT ACGAGTTCGC GCGGGCCATC GTCGAGGCCT CGGCCTTCGC CAGAGGCGGA
AAGATGCCGG CGGTCGTTCC CATCGCCACC GCGGACTATC CGCTTCCGGC CCGCCGCCCG
GCCTGGTCGG TGCTCGACTG CGGCAAGATG GCGTCGGAAT TCGGCATAGA ACCCGTGTCC
TGGCGGGAGG GGCTGGCCGT GGTGATCGGG GCCTTGAGCG CGTGA
 
Protein sequence
MTKILIIGHR GMLGTDLTER LRSQGFAVEG VDRDELDIAV PEEVLRCLET IRPRLVINCA 
AYTAVDRAEG EPGAAFAVNR DGPAHIAAAC GRLNSPLIHI STDYVFDGRA SAPYKEDDPV
NPVSVYGRSK WEGEAAVRSR LQNHLIVRTA WLFGANGNSF VKTILRLAAE RAELRIVSDQ
YGCPTWTGDL ASALTGLSKR VLDGARTVPW GTYHYCGKGA VSWYEFARAI VEASAFARGG
KMPAVVPIAT ADYPLPARRP AWSVLDCGKM ASEFGIEPVS WREGLAVVIG ALSA