Gene Sfum_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2149 
Symbol 
ID4459538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2626250 
End bp2629291 
Gene Length3042 bp 
Protein Length1013 aa 
Translation table11 
GC content61% 
IMG OID639702915 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_846266 
Protein GI116749579 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins
[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC TATCGCGAAA TCTGGTCGGA TCGGTCATGG TGGTCGGAGG AGGGATCGCC 
GGGGTGCAGG CGGCCCTGGA CTTGGCCGAT ACGGGTTATT TCGTGCACAT GGTCGAAAAG
AGCGAAGCCA TAGGCGGCGT GATGAGCGCG CTCGACAAGA CCTTTCCCAC CAACGACTGT
TCCATGTGTA TCCTGTCCCC CAAGCTCGTG GAATGTGGGC GGCATCCCAA TATCGAGATT
CTCACGTTGA CGGAGGTCCG TGAAGTGGGG GGAGAAGCGG GGTGCTTCTC CGTGAAGCTC
CGGTCGAGGG CCCGTTACAT CGATGCGAAG AAATGCATCG CCTGCGGCGT GTGCGCGCAA
AAGTGTCCCC GGAAGGTCCC CGATGCGTTC AACCTGGGAT TGAACCGGCG CAAGGCGGCT
TATGTCAAGT ATCCTCAGGC CGTGCCGCTC AAGTACGCCA TAGACAGGGA GCACTGTCTC
TACTTCGAAA AAGGAAAATG CCGGGCATGC GAGAAGTTCT GCCCGGCGGG CGCCGTCAAT
TTCGAAGACG AGGACAGGGA TTTCAGTCTT GAAGTGGGGA GCATCATTCT GGCTCCGGGA
TTTCAGACGT TCGATCCGAA AGTTTTCGAT ACCTACAACT ATTCCCGCTT CCCCAACGTT
ATCACGTCCA TGGAGTTCGA ACGCGTTCTC TCCCCTTCGG GGCCTTCCGG GGGGCACCTC
GCCCGTCCCT CCGACGGAAG GGAGCCCCGG CGCATCGCCT GGCTTCAGTG TGTCGGGTCA
AGAGAGCTCA ATCGCTGCGA CAACGCCCAC TGTTCGGCGG TCTGCTGCAT GTACGCCGTC
AAGGAGGCGG TCATTGCGAA GGAACACAGC CGCGAGCCGC TCGATGCAAC CATCTTCTTC
ATGGACATGA GGACTTCGGG AAAAGATTTT GAAAAGTATT ACCAGCGGGC GCGTGAGGAG
CAGGGGATTC GCTTCGTGCG ATCCCGCGTT CACAGCGTCG AGCAGGCCCG GGAATCGGGG
AATTGCCTGA TCCGGTATGC CGCCGATGAC GGGTTGCCGC GTGAGGAGGA ATTCGATCTG
GTCGTGCTTT CGGTGGGACT CGAGACGTCG CCGCAGGTTC TCGAGCTCGC CCGCCGGATG
GGGATCGCGA TCGATGCAGC GCGTTTTGCG GCCACTGCTC CGTTTGCACC GGTTTCCACG
TCCGTGCCCG GGATATTCGT TTGCGGGGCG TTCCAGGGTC CCAAGGATAT TCCCCAGTCG
GTCATTGAGG CGTCGGCGGC GGCGGCCGAG GCGGCTTCGC TTCTCGCGCC GGTGCGCGGC
GCCGTCGCAA GAAAACCCGC GGAAACGGCG GAATCCGAGA TCTCCGGCGA GGAACCTCCA
CGTATCGGTG TGTTTGTATG TCACTGCGGC ATCAACATCG GGGCGGTCGT GGACGTTCCC
GCCGTGAAGG ATTATGCGGG AACGCTTTCG GACGTGGCGT ACGTGGAAGA GAGCCTCTTC
ACGTGTTCGC AGGACGCCCA GGATCGCATG AAGGAAGCGA TCCGCGAGCA CGGTCTGAAC
CGCGTGGTGG TGGCGTCCTG TTCTCCGCGC ACGCACGAAC CCCTCTTTCA GCAGACCATC
CGTGAAGCGG GCCTCAACAA GTATCTTTTC GAGCTCGCCA ATATCCGGGA CCAGAATTCC
TGGGTACACC AGGATTTTCC GGAGGCGGCC ACGATCAAGG CCAAAGACCT GGTACGCATG
GCGGTGGCGA AGGTCGCTCT GCAAAAGCCG CTCGAGGAAA TTCGACTCAA CGTCACAAGG
AGCGGGTTGG TCCTCGGGGG CGGTGTTGCG GGCATGGAGG CCGCACTGGC GCTGGGCGGC
CAGGGATTTC CGGTGACTCT CGTCGAACGG GGGGACGACC TGGGCGGAAA CGCTCGAAAG
CTGCTGACCG TCTGGAACGG CGATCCCGTT CGTCCTTACC TGGATTCTCT CATCGAGAGA
GTGGAGAACC ATCCCCTCAT CACGGTTCGC AAAAAAACCG TCCTGAAAGA AGTTCGGGGC
TTTGTGGGGA ATTTTTGTTC CGTATTGGAA TCCGGCGGCA ACAGCGAAGA AGTGCATCAC
GGGGTGGCCG TGATCGCCAC GGGGGGACAG CCCCACAAGC CGGACGAGTA CGGATACGGC
ACCGACGGGC GCATCTGTCT CAACACAGAG CTGGATGAAG CCGTTTCGAA CCGCCGCAGG
TCGTTCGTGG ACGCACGGTC CGCCGTTTTC ATCCAGTGCG TGGGTTCGCG AGAGCCTGCG
CGGCCCTATT GCAGCCGGGT CTGCTGCAGC CACTCCATCG AGAACGCCAT ACGTCTCAAA
GAGATCAACC CGGCCATGGA TGTCGTCATT CTCTATCGGG ATATCCGCAC CCACGGACTT
CGCGAAAATC TCTACAGGGA GGCCCGGCGA AGAGGCGTGC TCTTTATCCG TTTCGACGCG
GATCGAAAGC CCGAAGTGGA AACCGGAGGG GACAGCCTCC AAGTTACGGT ATTCGATCCC
ATCCTGCAAA GACGGATCGT CCTGCATCCG GATGTTTTGA CGTTGGCGAG TGCCATAGAG
CCGCGGGAAT CGGAAGGGCC GGCGAAGCTG TTCAAAGTCC CCCGGAACCC GGAGGGCTTC
TTCCTGGAGG CTCATATGAA GCTCCGCCCC GTGGACTTTG CCACGGAAGG GGTTTACGTG
GCCGGCCTGG CTCACTGGCC CAAGCCCCTG GAAGAGAGCA TCGCCCAGGC CAAAGCCGCT
GCGGCCAGGG CGGCCACTGT CCTGGCCAGG GATTTCATCG TGGCGGGCGG CGTGACGGCC
GTCGTGGAAA AAGACAGGTG TTCGGGCTGC CGCGCATGCG TCGAGTGCTG TCCCTTCGGG
GCTGTCAGCT ACCTGGAACG GGAGGGCCGA TGTGAAGTGA ACCAGGCGCT CTGCAAAGGC
TGCGGAACCT GTGCTTCAGC CTGTCCCTCC GAGGCCGTTT CGCTGATGGG ATTCAGTAAC
CCGCAGATCT ACAGGCAGAT CGACGAAGCC CTTTCGGCTT GA
 
Protein sequence
MSNLSRNLVG SVMVVGGGIA GVQAALDLAD TGYFVHMVEK SEAIGGVMSA LDKTFPTNDC 
SMCILSPKLV ECGRHPNIEI LTLTEVREVG GEAGCFSVKL RSRARYIDAK KCIACGVCAQ
KCPRKVPDAF NLGLNRRKAA YVKYPQAVPL KYAIDREHCL YFEKGKCRAC EKFCPAGAVN
FEDEDRDFSL EVGSIILAPG FQTFDPKVFD TYNYSRFPNV ITSMEFERVL SPSGPSGGHL
ARPSDGREPR RIAWLQCVGS RELNRCDNAH CSAVCCMYAV KEAVIAKEHS REPLDATIFF
MDMRTSGKDF EKYYQRAREE QGIRFVRSRV HSVEQARESG NCLIRYAADD GLPREEEFDL
VVLSVGLETS PQVLELARRM GIAIDAARFA ATAPFAPVST SVPGIFVCGA FQGPKDIPQS
VIEASAAAAE AASLLAPVRG AVARKPAETA ESEISGEEPP RIGVFVCHCG INIGAVVDVP
AVKDYAGTLS DVAYVEESLF TCSQDAQDRM KEAIREHGLN RVVVASCSPR THEPLFQQTI
REAGLNKYLF ELANIRDQNS WVHQDFPEAA TIKAKDLVRM AVAKVALQKP LEEIRLNVTR
SGLVLGGGVA GMEAALALGG QGFPVTLVER GDDLGGNARK LLTVWNGDPV RPYLDSLIER
VENHPLITVR KKTVLKEVRG FVGNFCSVLE SGGNSEEVHH GVAVIATGGQ PHKPDEYGYG
TDGRICLNTE LDEAVSNRRR SFVDARSAVF IQCVGSREPA RPYCSRVCCS HSIENAIRLK
EINPAMDVVI LYRDIRTHGL RENLYREARR RGVLFIRFDA DRKPEVETGG DSLQVTVFDP
ILQRRIVLHP DVLTLASAIE PRESEGPAKL FKVPRNPEGF FLEAHMKLRP VDFATEGVYV
AGLAHWPKPL EESIAQAKAA AARAATVLAR DFIVAGGVTA VVEKDRCSGC RACVECCPFG
AVSYLEREGR CEVNQALCKG CGTCASACPS EAVSLMGFSN PQIYRQIDEA LSA