Gene Sfum_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2133 
Symbol 
ID4459557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2608349 
End bp2609119 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID639702899 
ProductABC transporter related 
Protein accessionYP_846250 
Protein GI116749563 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0112953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCGCC TGGACGGGGT GACCTGCGGC TATGCCGGGC AAACGGTGCT CAAGGACCTC 
TCCTTTCTTG TCCGGCGCGG GGAATTCATC GGCGTGCTGG GGCCGAACGG GGCGGGGAAG
TCCACCCTCA TGCTGGCGTT GAGCGGTATC GTGCCGGTGC AGTCGGGTTC GATCGAGATC
GAAGGGAAAC CGCTGGCCCG TCTCAAGACC AGGGAACGGG CCCGCCTGAT GGCCGTGGTG
GCTCAGGATA TCGACCTGCG TTTTCCCTTT CGCTGCGAAG AAGTGGTCCG CATGGGGCGA
TATCCTCATC AGAAACGCTG GCAGATGGAG AGCCCGGAGG ACGAAGCCGC GGTCCGGAGA
GCGCTCGGGG CGACGGATAC CGCCATGCTG GCCAAGCGTC TCATCACGGC GGTCAGCGGC
GGCGAAAAAC AGCGTGTCGT GATGGCGCGC TCACTCGCCC AGGAAACCCC CATCCTGCTG
CTCGACGAAG CCACGTCGGC CATGGATATC CACCGCAAGC TCCTGATCTT CCGGGTGCTC
GACCGCCTGA ACCGGGAGGA CGGCCTGACC GTGGTGGCGG TGCTCCACGA CGTCAATCTG
GCCGCTCTCT TCTGCAGGAG AATGATCTTT CTCAAGAACG GAGAGCTCGT GGCCGACGGC
GCGGTCGATA CAGTCTTGAA CGCGGACGTT CTGGAGCACG TCTACGAGAC GCCCGTGATG
GTCCGCGAGA TCGAAGGAAC GGAAAAGCGG CAGGTGGTTT TTCTCCCGTA G
 
Protein sequence
MIRLDGVTCG YAGQTVLKDL SFLVRRGEFI GVLGPNGAGK STLMLALSGI VPVQSGSIEI 
EGKPLARLKT RERARLMAVV AQDIDLRFPF RCEEVVRMGR YPHQKRWQME SPEDEAAVRR
ALGATDTAML AKRLITAVSG GEKQRVVMAR SLAQETPILL LDEATSAMDI HRKLLIFRVL
DRLNREDGLT VVAVLHDVNL AALFCRRMIF LKNGELVADG AVDTVLNADV LEHVYETPVM
VREIEGTEKR QVVFLP