| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2103 |
|---|
| Symbol | |
|---|
| ID | 4459597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2572382 |
|---|
| End bp | 2573095 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639702870 |
|---|
| Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| Protein accession | YP_846221 |
|---|
| Protein GI | 116749534 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00881191 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGC GATTCAAGAT TTTCCGGTTC GATCCCGAAA CGGACGAGGA ACCGTACTAC
CGGAACTACA CGGTTGTCGC CGAACCCCAG GAACGCATCC TGGACTGTCT GAACCGGATC
AAGTGGGAAC AGGACGGGAC CCTGGCCTAT CGCATGTCGT GCGGACACGG AGTGTGCGGC
TCCGACGGCA TGCGCATCAA CGGCGTCTGC GGTCTGGCCT GCCAGAAGCT GGTCAGGGAG
TACGAGGGGC TGGAGGTTGT CCTGGAGCCG CTCCCCTTTT TCAAGGTGCT CAAGGACCTG
GTCGTGGACA TGGAGCATTT CCTTGACGGC ATACGGCTGA TCCGCCCTTA CCTGGTTTCG
GATTCGGCCC CGCCCGAGGC GGAGAGGCAG CAGAGTCCCG AAGACCGAAA GAAGGTCGAC
GACGTCATCC GGTGCATTCT GTGCGCCTGC TGCACGGGGT CGTGCCCGGT GATGATCCAG
AACGAGAAAT ATGTCGGGCC GGCCGCGCTG GTGTGGGCGT ACCGCTTCAT CTTCGACACC
AGAGACGATC GATACGCGGA GCGACTCAAG CAGATCGATT TCCATGACGG CGCGTGGTCC
TGCGTGAACT TCTTCGAATG CACGCGCGTG TGCCCCAAGG GGATTCCCGT GACCAAGTCC
ATCAACTTTC TGAAACGGGA GATTCAGAAG GCCCTTCCGG GCCGCACGGG GTAG
|
|---|
| Protein sequence | MEMRFKIFRF DPETDEEPYY RNYTVVAEPQ ERILDCLNRI KWEQDGTLAY RMSCGHGVCG
SDGMRINGVC GLACQKLVRE YEGLEVVLEP LPFFKVLKDL VVDMEHFLDG IRLIRPYLVS
DSAPPEAERQ QSPEDRKKVD DVIRCILCAC CTGSCPVMIQ NEKYVGPAAL VWAYRFIFDT
RDDRYAERLK QIDFHDGAWS CVNFFECTRV CPKGIPVTKS INFLKREIQK ALPGRTG
|
|---|
| |