Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2071 |
Symbol | |
ID | 4459600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2533164 |
End bp | 2533763 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639702838 |
Product | OstA family protein |
Protein accession | YP_846189 |
Protein GI | 116749502 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0437606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCAA TAATGAAGAA CCGTCTGCGA AGAGAGACGC TTGTGCTGCT GGTGCTGGTG CTGGTCGGCC TCTGCCTCCC CCGGGAAGCG GTCTCGGCCG AAAAGCGGAA GAAGCCCGCG GAGACGAAGC AAGGCACCCC CGCCGGCGAG AGACTCATGA AAAGCGATTC GCCTCTGCAC ATCGCAAGCG ATCGAATGGA GGTGCGGCAG CGGGACAGGA CGATTGTCTT TCAGGGGCAC GTCGTGGTTC GTCAGGACGA TCTGACGATT ACGGGGAACC AGTTGAAAGT GACCGCGGCC CGGGTGGACC CGTCCATCCG CAACGACCAG TCCGCCATCG TGGAGAAGAT CGACAGGATA GAGGTGGAAG GCGGGGTGAA GATCACTCAA CGCGAAAAGC AGGCCACCGC CGACAAGGCG GTCTACTATC ACCAGGAGCA GAAGATCGTG CTGCTGGGCA ACCCCGTCGT GTCCCAGGGG TTGGACAAGG TGCAGGGGCG GCTGATCACG CTGTACATTG CGGAGGGGAA GAGCGTGGTG GAGGGGGGGG AGCAGACTCC CGTCCAGGCC CTGCTTCACC CGTCCCGAAA GGAACCGTGA
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Protein sequence | MMAIMKNRLR RETLVLLVLV LVGLCLPREA VSAEKRKKPA ETKQGTPAGE RLMKSDSPLH IASDRMEVRQ RDRTIVFQGH VVVRQDDLTI TGNQLKVTAA RVDPSIRNDQ SAIVEKIDRI EVEGGVKITQ REKQATADKA VYYHQEQKIV LLGNPVVSQG LDKVQGRLIT LYIAEGKSVV EGGEQTPVQA LLHPSRKEP
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