| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2057 |
|---|
| Symbol | |
|---|
| ID | 4459636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2515162 |
|---|
| End bp | 2516295 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639702823 |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_846175 |
|---|
| Protein GI | 116749488 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.280737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCG AAAAATTTCG ATCCGGTATA CACAGGCAGC AGTATCAGTA CAAGAGCTTT
TCTCCCTCGC CGGTGAATCA GCCATGGACT TGGGAGGATC CCAAGATTAA CACCCTGTTG
GAACGCGCAT CCCAGTCCAT GGCTGAACTC AATGCGTTTT CGCTGATCGT GCCCGATGTT
GATTTGTTCA TCATGATGCA TGTTTACAAG GAGGCCAGCA CCTCGAGCCG GATTGAAGGC
ACTCGAACGG GAATGGATGA GGCAATCCTC GATAGGGAGT ACATCGATCC CGAGAAACGA
GATGACTGGC AAGAAGTTCA GAATTACGTA CAGGCCATGA ATCTCGCGGT CCGGGAATTG
AGCACTCTTC CTCTGTCCAA CCGGTTGCTT CGCGCCACTC ATGAGCGCCT CATGCAGGGT
GTCAGGGGCG AGCACAAGCC CCCCGGAGAA TTCAGGCGGA GTCAGAATTG GATCGGTGGA
ACCAGCCTGC AGGACGCAGT TTTCATTCCG CCTGCGCCGG AGGAAGTCCC TGAGTTAATG
AGCGACCTGG AGAAATTCTG GCATAATGAA GAAATCGACG TCCCACATCT GATTCGGATT
GCGATCAGCC ATTACCAGTT CGAGACCATT CACCCCTTCC TGGATGGAAA CGGTCGCATC
GGACGTTTGC TGATAACGCT ATATCTTGTC GGTAAGAGGC TTCTGAGTAA ACCGTCCCTG
TATCTCTCGG ACTACATGGA GAAGCACAAG GGTGCCTACT ATGATGCCCT TACTACAGTC
AGAGCGTCGA ACGATTTGAG CCATTGGGTC AAGTTTTTTC TTGTGGCCGT CCACGAAACA
GCGAAAAAAG GCAGCCACAC GTTCCAACAG ATCCTGGCCC TCCGATCCGA GGTGGAATCG
AAGCTTTTTA AATTGGGCAA AAAGGCGCAG AATGGAGGTA ACCTATTGAA TATTCTATAT
CAGAAACCCA TTGTGACTGC CAATGAAGTT GCGGAGAAGC TTGCCGTCTC ACATCAAACA
GCCAGCGCTT TGATCAGGGA TTTCATGAGC TTGGGCATCC TCACGGAAAT CACCGGCTAC
CAGAGAAACC GCATGTTTGA ATTTGAGAAC TATCTGAAAC TATTTATCAA TTAG
|
|---|
| Protein sequence | MKFEKFRSGI HRQQYQYKSF SPSPVNQPWT WEDPKINTLL ERASQSMAEL NAFSLIVPDV
DLFIMMHVYK EASTSSRIEG TRTGMDEAIL DREYIDPEKR DDWQEVQNYV QAMNLAVREL
STLPLSNRLL RATHERLMQG VRGEHKPPGE FRRSQNWIGG TSLQDAVFIP PAPEEVPELM
SDLEKFWHNE EIDVPHLIRI AISHYQFETI HPFLDGNGRI GRLLITLYLV GKRLLSKPSL
YLSDYMEKHK GAYYDALTTV RASNDLSHWV KFFLVAVHET AKKGSHTFQQ ILALRSEVES
KLFKLGKKAQ NGGNLLNILY QKPIVTANEV AEKLAVSHQT ASALIRDFMS LGILTEITGY
QRNRMFEFEN YLKLFIN
|
|---|
| |