Gene Sfum_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2010 
Symbol 
ID4459676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2460219 
End bp2461073 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content66% 
IMG OID639702776 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_846128 
Protein GI116749441 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG TCCTGATACC CGAATCGATG GAGGAGCTCC GGCGGATCCT GGAAACGCAC 
CCCGGGGCGC GGGTCTATGC CGGGGGCACG GACCTTCTGG TGAAAATGCG AAGCGGCCTC
GAAGCCGTGC CGCCCTGCCT GGTCTGTCTC GAAAGAATAG CGGAGCTTGA CGCGGTGAGC
GAACACGGGG AGGTGGTGCG TATCGGCGCC TGCGTCACGC ACACCCGGCT CCTGGCCGAT
CCCGTGGCGA CCGAACACCT GCCGGTCCTG GTCCGGGCGG TTGAAGTGCT GGGGTCGCGG
CTCATCCGGA ACATGGGGAC CATCGGCGGA AATGTGTGCA CGGCCTCCCC CGCGGGCGAC
ACCCTCCCGC CGCTCTATGT GCTCGATGCG GAACTGGAGC TGCGCGGCGG GACCGGAAGT
CGAATCGTGG CCCTGAAGGA CTTCATCAAA GGGCCCGGGC AGACGGTCCT CGGCGAGAAC
GAAATCCTGG CCGCCGTTCG CATCAGAAAG CCTCGGATGT TCAACTTGTT CCATTATGAA
AAGGTCGGGC AGCGCAAGGG GCTTTGCTGC TCGGCCGTGA GCCTCGCCGC AATGCTGCGC
GTCTCCTCGG GGGGCGTGGT CGAGGACGCC GCCCTGGCGT GGGGAAGCGT CGGCCCGACG
GTCGTGAGGT CCCGGGAGAT CGAACGAATG CTGATTGGCA AAGAGCTCAC CGCGGAGCGG
ATGAGGGAGG CTGCAGCGGA AGTCGGGAAA ATCGTTTCCC CCATAAGTGA CGTGCGCGCC
GATGCCGCAT ACCGCCGTGC CGTTGCCGGA AACCTGCTGC TGCGGCTGGC GGCTCGGGAC
GGGTCTTCCC CTTGA
 
Protein sequence
MTNVLIPESM EELRRILETH PGARVYAGGT DLLVKMRSGL EAVPPCLVCL ERIAELDAVS 
EHGEVVRIGA CVTHTRLLAD PVATEHLPVL VRAVEVLGSR LIRNMGTIGG NVCTASPAGD
TLPPLYVLDA ELELRGGTGS RIVALKDFIK GPGQTVLGEN EILAAVRIRK PRMFNLFHYE
KVGQRKGLCC SAVSLAAMLR VSSGGVVEDA ALAWGSVGPT VVRSREIERM LIGKELTAER
MREAAAEVGK IVSPISDVRA DAAYRRAVAG NLLLRLAARD GSSP