| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2005 |
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| Symbol | |
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| ID | 4459671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2454394 |
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| End bp | 2455821 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702771 |
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| Product | protease Do |
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| Protein accession | YP_846123 |
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| Protein GI | 116749436 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGTCG CGGCCTTCTT TGTGGGCGGT TTGGCGGCTT CATCGGGATT GAATCCCGGT
AGACTTCTCG CGGTGCCGGA TGCGGCCCAG GCAGCGCCCG CTGAAGGGGA TCAGCCAGGA
GTAACCCCAA CCAGCCCGTT CGCCACGCTG GCGGCAAAAC TCACGCCCGT GGTGGTCAAC
GTCAGGGTGA CCAAAATCGA ACGGGCGGAG TTCCCCGATT TTGAAGGACC GGAGCAGCCG
TTCGGAGACT TTTTCAGGCA TTTTTTCGGC GACCGGCGGG GATTTCCGAA TGTCCCGGCG
CAGGGCGCAG GTTCGGGAGT GATCATCCGC GGCGACGGGT ATGTCCTGAC CAACAATCAC
GTGGTTGAAG GCGCCAGGGA AGTGACCGTG ACGCTTTCCG ACAAGCAGGA ACACAAAGCG
CGAATCGTCG GGCGGGATGC CAAGACCGAC CTCGCGCTTC TCAAAATTGA AGCGGGCAAA
AGCCTGCCTG CCGCCAGCCT GGGCGATTCC GACCAACTCA AGGTCGGGGA TTGGGTGATG
GCCATCGGCA ACCCGTTCGG TCTCAGTGAA ACGGTCACTT CCGGGATCGT CAGCGCCAAA
GGCCGCGTCA TTGGGGCGGG CCCCTATGAC GACTTCATCC AGACCGATGC CTCGATCAAC
CCGGGCAATT CGGGAGGACC GCTTTTCAAT ATGAAGGGCG AAGTCGTGGG GATCAACACC
GCCATCATCC CGAACGCCCA GGGAATCGGA TTCGCCATTC CCGTCAACAC GGCCAAGCCG
CTGATTCCTC AGCTGGAAAC CAAAGGCGAA GTGACTCGGG GGTACCTGGG AGTCAGCATC
CAGTCGATCA CGCCCGATCT TGCCTCGGCA ATGGGGCTGG GTGACGGGAA GGGAGCGCTG
GTGGCGGACG TCGTTGAAGG CGGTCCCGCC GACAGGGCCG GGATCCGGCG CGGGGACGTG
ATCCTCGCCT TTGGAGGCAA GGACGTCAAA GACAGTCACG ATCTCTCGTT CATGGTCGCC
GCGGCCCCGG TGGGCAGGGA ATCCGCGGTG ACGATCATGC GGGAGGGCGT CGAGCGGCGG
CTGGACGTCA AGATCGGAAA ACAGGAATCC GAGGAAGGGG CGAAGGAGGA ATTTTCGAAA
CAGGCTCACG GCAAATGGGG CCTCCAGCTC CGGGATGTGC CTCCCCGGGT TGCGGAAGAG
CTCGGCCTCG AGTCGGAGCG CGGGGCACTC GTGGCCGGCG TTCTCCCGGG AAGCCCGGCG
GATCGGGCCG CCCTGCGGCA GGGGGATGTC ATCCTGGAGG TCAATCGTCA GCCCGTAACA
TCGGCGAGCG AGCTCAAAGA AAGGATTGCC GGGGCGGGCG AGCGGGGTGC CCTGGTTCTC
CTCGTGCAGA GCAGTCGGGG GACGAGGTAC GTCGTGCTGA AGGGCTGA
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| Protein sequence | MVVAAFFVGG LAASSGLNPG RLLAVPDAAQ AAPAEGDQPG VTPTSPFATL AAKLTPVVVN
VRVTKIERAE FPDFEGPEQP FGDFFRHFFG DRRGFPNVPA QGAGSGVIIR GDGYVLTNNH
VVEGAREVTV TLSDKQEHKA RIVGRDAKTD LALLKIEAGK SLPAASLGDS DQLKVGDWVM
AIGNPFGLSE TVTSGIVSAK GRVIGAGPYD DFIQTDASIN PGNSGGPLFN MKGEVVGINT
AIIPNAQGIG FAIPVNTAKP LIPQLETKGE VTRGYLGVSI QSITPDLASA MGLGDGKGAL
VADVVEGGPA DRAGIRRGDV ILAFGGKDVK DSHDLSFMVA AAPVGRESAV TIMREGVERR
LDVKIGKQES EEGAKEEFSK QAHGKWGLQL RDVPPRVAEE LGLESERGAL VAGVLPGSPA
DRAALRQGDV ILEVNRQPVT SASELKERIA GAGERGALVL LVQSSRGTRY VVLKG
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