Gene Sfum_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1999 
Symbol 
ID4459700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2448096 
End bp2449955 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content60% 
IMG OID639702765 
Productfumarate reductase flavoprotein subunit 
Protein accessionYP_846117 
Protein GI116749430 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000679701 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATACCT TCTATACCGA TCTGTTGTGT GTAGGGGCGG GTTTGGCAGG CGAGCGCGTG 
GCAGTGGCGG CGGCCTCTGA GGGCTTTTCG ACCATATGCC TGAGCATCGT ACCACCAAGG
CGTTCCCATT CTTCTGCCGC CCAGGGCGGC ATGCAGGCCT CGCTGGGCAA CTGCTGCATG
GGCGAAGGCG ATTGCCCTGA CGTTCACTTT GCTGACACGG TAAAGGGCTC CGACTGGGGA
TGCGACCAGG AATGCGCACG TTTGTTTGCT GAAACGGCGC CGATTGCCGT TCGTGAAATG
GCGTTTTGGG GAATTCCGTG GAACCGCGTG GTGGCTGGTG AAGGAACGTA TTACAAGGGC
GGCAAGCAGT ATCAGAAGAT CGAAAAGAAA GAAATGGAGG GGACGATCAC CGCCCGCGAT
TTCGGCGGCA CGGCCAAGTG GAGGACGTGT TACACGTCGG ACGGCACGGG CCATACGCTG
CTGTTCACCA TGGACAACAA GGTGGTGGAA CTGGGCGTGA CCGTACACGA CCGGGTCGAC
GCCATCTCTC TGATCCATGA CGGCGAAACC TGCATGGGCG TCGTGGCAAG AGACCTGAAG
ACCGGTAACC TGCGTGCATA CCTGGCCAAG GCGACCCTCA TCGCCACGGG CGGTTACGGC
CGCACGTACA GGGAAACGAC CAACGCGGTC ATCAACGACG GCAGTGGTGT CATTCTCGCC
CTGGATACGG GCATTGTCCC CTTCGGCAAC CCGGAGGCGG TGCAGTTTCA CCCCACCGGC
ATCGTTCCCA CCAACATTCT GGTGACCGAA GGCTGCCGTG GAGACGGTGG AACCTTGAAA
GACGTGAACG GCGAACGGTT CATGCACATC TACGAACCCG GAAAGCAGGA ATTGGCGTCG
CGTGACGTCG TTTCCCGCTG GATGACCCAT CATATCCGCA TCGGGAAGGG TGTGCCGAGC
CCCTACGGGC CGCACCTGTG GCTCGATATT CGCCATCTGG GCGCAGCCCA CATCAAGACG
AAACTCCGCG ACGTCGAAGA GATATGCAAC GAATTCCTCG ATGTCGATCC CATCACCCAG
ATGATCCCGG TCCGCCCGGC CCAGCACTAC AGCATGGGCG GTGTGCGCAC CAACAAGGAC
GGTGCCGCGT ACGGATTGAA GGGTCTTTTT GCAGCCGGTG AGGCCGCCTG CTGGGATATG
CACGGATTCA ACCGCCTGGG CGGCAACTCG CTTGCCGAGA CGATCGTTGC CGGTAAGATC
GTGGGCGAGA AAATCGCCGA GTTCCTCAAG GGATACGAGG TCAATATCAA GACCGAAGTG
GTGCGCGACG CGGTGAACAA GCAGGAAGCG CGGATTGCGG CTCTCATCGC CGGCCGCGAC
GGCAAAGAGA GCGTCTACGC CGTGCGTAAC GCCATCCAGG ATGCCTTGAT GGAAGGCGTC
GGGATTTTCC GCAACGAGGC CGACCTGAAG AAAGCCGTCG ACACCCTGCA AGTGGTCTAT
GAAAGGTCCA AGAAGGTCGG TATTCAGTCG CGCGTTATCG GTGTCAATCC CGAGGTGGCG
ATGGCTCTGC GCATTCAGGG CATGTGCCGT ATCGCGCTGT GCGTCGCTTA TGCGGCCCTG
CAGAGGACCG AGAGCCGCGG CGCTCATGCC CGCGAGGATT ACCCGGAACG CAACGACCGC
GATTGGCTGA AGCGGACGCT GGCGACCTGG AAAGAGGGCG ATAACCTGCC TACCCTGAAC
TACGAGAAGC CTTCGAAGGT CTGGGAACTT CCGCCGGGCG AAAGAGGTTA CGGCGTGGCG
AAGATCATTT ACTCCGAAGA TCCCGAGGTT ATCGGTTCGA GCAAACCGGC TACCAACTAA
 
Protein sequence
MDTFYTDLLC VGAGLAGERV AVAAASEGFS TICLSIVPPR RSHSSAAQGG MQASLGNCCM 
GEGDCPDVHF ADTVKGSDWG CDQECARLFA ETAPIAVREM AFWGIPWNRV VAGEGTYYKG
GKQYQKIEKK EMEGTITARD FGGTAKWRTC YTSDGTGHTL LFTMDNKVVE LGVTVHDRVD
AISLIHDGET CMGVVARDLK TGNLRAYLAK ATLIATGGYG RTYRETTNAV INDGSGVILA
LDTGIVPFGN PEAVQFHPTG IVPTNILVTE GCRGDGGTLK DVNGERFMHI YEPGKQELAS
RDVVSRWMTH HIRIGKGVPS PYGPHLWLDI RHLGAAHIKT KLRDVEEICN EFLDVDPITQ
MIPVRPAQHY SMGGVRTNKD GAAYGLKGLF AAGEAACWDM HGFNRLGGNS LAETIVAGKI
VGEKIAEFLK GYEVNIKTEV VRDAVNKQEA RIAALIAGRD GKESVYAVRN AIQDALMEGV
GIFRNEADLK KAVDTLQVVY ERSKKVGIQS RVIGVNPEVA MALRIQGMCR IALCVAYAAL
QRTESRGAHA REDYPERNDR DWLKRTLATW KEGDNLPTLN YEKPSKVWEL PPGERGYGVA
KIIYSEDPEV IGSSKPATN