Gene Sfum_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1995 
Symbol 
ID4459696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2442777 
End bp2443994 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content60% 
IMG OID639702761 
Productradical SAM domain-containing protein 
Protein accessionYP_846113 
Protein GI116749426 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTC CGCCGAAGTG TTCTGATCCC CCGCCGGCGA CCGCTCGCGC CCAGGCGAGG 
AGACCGGTCG GCAGAAGAGA GTTCCTGGCG CAATGCGGAC GCTGCGCGCT TTTGTGCGCC
GGTTTCAAGG CCCTGGATTG GGCGACGCCT CCGTCGGTTC GTCCCGACGG TCCCGGCCGG
GGATACATCG GACGCAAGTT GTCCCCCTAT TTTTCCCCGC TGGGCGGCGG ACGAATCCGC
TGCGAGCTCT GCCCCCGCTT TTGCGAAGTC GACGACGGGG AGCGCGGGTA TTGCCGGGTC
AGGCAGAACC GGGAGGGACA CTACTACTCC CTGGTGTACG GCAACCCGTG TGCCGTTCGT
GTCGACCCGG TGGAAAAGAA GCCGTTTTTT CACGTCCTTC CGGGGTCGCT CTCCTTCTCC
ATCGCCACGG CGGGATGCAA CCTGAACTGC AAGTTCTGTC AGAACTGGGA GATTTCTCAG
GCGAAACCGG ATGATACCTA CAACTACCAG GCCCCCCCAG AAACCGTGGC GGAAAATGCC
GCCCGGAACG AGTGCGCTTC CATTGCCTCC ACTTATGTCG AGCCGACCAT CTTCATCGAA
TACATGATCG ATATCGGAAA AGCGGCCAAG CCGAAAAGGA TTCTGAACGT CATGCATTCC
AACGGCTACA TCAATCCGGC CCCCCTCGAC GATCTGTGCC GGTTCCTGGA CGCGGCCTGC
ATCGATTTGA AAGGGTTTAC CGACGAGTAT TACAGGGAAA TGACCGAAGG AACCCTCGAA
CCGGTTCTGA GCACGCTGAA GAGGCTGAAG CAGCTGGGCG TCCACACGGA GATCGTCAAC
CTGGTGGTGC CCGGGAAAAA TGATAGGATG AGCGGGATCA GGGAGATGTG CAGGTGGATC
GGCAAGGAAC TGGGTCCGGA AACCCCGCTG CACTTCAGCC GGTTCCATCC GCTCTACAGG
CTCCAGAGTC TCCAGCCGAC GCCGGTTGCC ACGCTCGAAG AAGCATGGAA GGCCGCTCGA
GAAGAAGGCT TGCATCATGT GTATGTCGGC AATGTGCCGG GTCATCCCGG GGAGAGCACG
ATTTGTCCGA AATGCGGGAC CGTGCTCGTG GACCGAATCG GGTACACGGT GAGAAACGTT
CGCCTCAAAG ACGGAAAGTG CTCGCAGTGC AGCCGTCCCC TGCCCGGTAT ATGGAAACGA
CCCGAGGCGG ATGCGTAG
 
Protein sequence
MFFPPKCSDP PPATARAQAR RPVGRREFLA QCGRCALLCA GFKALDWATP PSVRPDGPGR 
GYIGRKLSPY FSPLGGGRIR CELCPRFCEV DDGERGYCRV RQNREGHYYS LVYGNPCAVR
VDPVEKKPFF HVLPGSLSFS IATAGCNLNC KFCQNWEISQ AKPDDTYNYQ APPETVAENA
ARNECASIAS TYVEPTIFIE YMIDIGKAAK PKRILNVMHS NGYINPAPLD DLCRFLDAAC
IDLKGFTDEY YREMTEGTLE PVLSTLKRLK QLGVHTEIVN LVVPGKNDRM SGIREMCRWI
GKELGPETPL HFSRFHPLYR LQSLQPTPVA TLEEAWKAAR EEGLHHVYVG NVPGHPGEST
ICPKCGTVLV DRIGYTVRNV RLKDGKCSQC SRPLPGIWKR PEADA