Gene Sfum_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1986 
Symbol 
ID4459687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2429196 
End bp2429576 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content56% 
IMG OID639702752 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_846104 
Protein GI116749417 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGGG TTTATGAAGT CTTTTTCCGA TCGGGTTTTT CGGCGGCCCA TCTTCTCCGC 
GATTACCCGG GAGACTGTGC GCGGCTTCAC GGTCACAACT GGACGGTGGA AGTGTACGTG
GAGTGCCGGG AGTTGGACGA AATCGGCATC GGAATCGATT TCTACGACAT CGACAAAGCC
CTGAAGCAGA TCATGGTCGA AATGGACCAC TGCAATCTCA ACGATCTGGC TGCCTTCAAG
GATCGGAATC CAACCTCCGA GAACCTGGCC CGATATGTAT ACCGGGAATT GTCCGGGAAA
CTCGATGCCC CCGCGATCAA GGTGGTCAAA GTGAAGGTCT GCGAGACCCC CGACGCGGGA
GTGACGTATC GGGAGGAATG A
 
Protein sequence
MPGVYEVFFR SGFSAAHLLR DYPGDCARLH GHNWTVEVYV ECRELDEIGI GIDFYDIDKA 
LKQIMVEMDH CNLNDLAAFK DRNPTSENLA RYVYRELSGK LDAPAIKVVK VKVCETPDAG
VTYREE