Gene Sfum_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1970 
Symbol 
ID4459706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2410024 
End bp2410866 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content57% 
IMG OID639702737 
Productoxidoreductase FAD/NAD(P)-binding subunit 
Protein accessionYP_846089 
Protein GI116749402 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAACC CTTACTTGCC CTACCCGGTC CGAATCGAAT CCATTGTGAC GGAGACGGAA 
GATCGAAATC TGAAGACGTT CAAGCTGGTT TTCCTGAACC CCGAGGACGA AGCCAGGTTC
AGCTACATGC CCGGCCAGTT TGCGGAGCTC TCAGTCGCCG GGCTCGGTGA GATTCCCATC
GGAATCGCTT CTTCTCCCAC CGAGAAAGGC TTCATCAAGT TTACAGTGAA CAAGGTCGGA
AAGGTGACCA GCTACCTTCA CAACATGAAC GCGGGCGACA TCATGGGCGT TCGCGGGCCC
ATGGGAAACT GGTATCCCTG GGACATCCTC CAGGGGAAGA ACGTGGTGAT CATCGGAGGC
GGCTTTGCGT TCACCACGCT CCGGTCTTCC ATCGTCTACA TGCTGGACCC CGCCAACAGG
CCCCGGTTCG GCGAGATCAA CGTGGTTTAC GGTGCGCGCT TTCCGGGACT CCTGCTCTAC
AAGGATGAGC TTGCGGCCTG GGAACGGCGC GACGATATCA AGATGCACAT CACCGTGGAC
GGGACCGACG ATCCCAACTG GAAATACAAC GTCGGTTTCG TTCCGGCGGT GACCAAACAG
AAAGCTCCGA GTGCCGAGAA TGCCTACGCC ATCATCTGCG GACCTCCGAT CATGATCAAG
TTCACGCTGC CGGTCCTCAC CGAGTTGGGC TTCCCCCCCG ATCGCATCAT CTCCAGCCTG
GAGATGCGGA TGAAATGCGG GATAGGCATT TGCGGCCGAT GCAATCTCGG CACCGAGTAC
GTGTGTAAGG ATGGGCCGGT TTTTACCCTG GAGAAATTGT CCCAACTTCC CAACGAATAC
TGA
 
Protein sequence
MNNPYLPYPV RIESIVTETE DRNLKTFKLV FLNPEDEARF SYMPGQFAEL SVAGLGEIPI 
GIASSPTEKG FIKFTVNKVG KVTSYLHNMN AGDIMGVRGP MGNWYPWDIL QGKNVVIIGG
GFAFTTLRSS IVYMLDPANR PRFGEINVVY GARFPGLLLY KDELAAWERR DDIKMHITVD
GTDDPNWKYN VGFVPAVTKQ KAPSAENAYA IICGPPIMIK FTLPVLTELG FPPDRIISSL
EMRMKCGIGI CGRCNLGTEY VCKDGPVFTL EKLSQLPNEY