| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1931 |
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| Symbol | lpxC |
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| ID | 4459768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2355382 |
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| End bp | 2356404 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702698 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_846051 |
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| Protein GI | 116749364 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.200464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0587182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCGGCTT GCCCCTGCCC GGGTAATTTG GCACACATCT TGCTGTTAAA CAGCCGTTTG
AGGAGGACAT GGGGCGTGAA ATTTTTCTAT CCGAGGCAGC ATACTGTCAC CAGGGAGGTG
TGGTGCGGAG GGGTGGGCCT GCACACCGGG GCTGACGTCA CCATTCGCCT GAAGCCGGCT
CCACCCGATT TCGGCATTCG TTTCCAGCGC ACGGATCTCA CCGGGAAACC CGTCATCACC
GCTCACTACC GACAGGTCGT GGACACTTTT CAGGCCACCA CCATCGGAAT CGCAGGTGCG
GTCGTCGGCA CCGTCGAACA CCTGATGGCG GCGTTCTACG GCTGCGGCGT GGACAATGTC
CTGGTGGAAG TGGACGGTCC GGAGATCCCT ATTCTCGACG GCAGCGCGGC TCCTTACACC
GGGCTCATCC GCAAGGCCGG CGTCCGGGAG CAGGATGCCG TGCGCAGGTG CCTGATCGTT
GACCGCCCCA TGGTGGTCAA GGAAGATGGG GCCTACATCC GCGTGACACC GTCGGATCAT
TTCCGCATCG ACTGCGCCAT CGACTTCCCG CATCCCCTGG TGGGGAAGCA GAGATACTCC
TGGTCCTTCT GCGAGAACTC TTTCAAGAGG GAAATCGCCA AGGCGAGGAC CTTCGGCTTT
CTCAAAGACG TCAGAAAGCT GCAAACCATG GGGAGAGCGC AGGGCGGGTC CCTGGCCAAC
GCAATCGTGC TCGACGAATG CGGGCTCCTC AACCGCGAGG GCTTCCGCTA CGCGGACGAG
TGCGTGCGTC ACAAGCTCCT CGACTTCATG GGAGATTTGG CCTTGATCGG CATGCCCGTG
GTGGGCGCTT TTCATGTCCA CAGGGCCGGG CATTCCCTGC ACAGCCGTTT CCTGAAACAG
CTCATGACGC GCCCCGGCAC CTGCAGCCTG GCCCAGCCTT CCTGCATCCC CACGGGAGTT
TTCCCGGCGT CCCGCCTCCC GGCGTTCGCC GGTCAGATCT CTTCCGTGGC GAAGCCCATC
TGA
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| Protein sequence | MPACPCPGNL AHILLLNSRL RRTWGVKFFY PRQHTVTREV WCGGVGLHTG ADVTIRLKPA
PPDFGIRFQR TDLTGKPVIT AHYRQVVDTF QATTIGIAGA VVGTVEHLMA AFYGCGVDNV
LVEVDGPEIP ILDGSAAPYT GLIRKAGVRE QDAVRRCLIV DRPMVVKEDG AYIRVTPSDH
FRIDCAIDFP HPLVGKQRYS WSFCENSFKR EIAKARTFGF LKDVRKLQTM GRAQGGSLAN
AIVLDECGLL NREGFRYADE CVRHKLLDFM GDLALIGMPV VGAFHVHRAG HSLHSRFLKQ
LMTRPGTCSL AQPSCIPTGV FPASRLPAFA GQISSVAKPI
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