Gene Sfum_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1908 
Symbol 
ID4459779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2328199 
End bp2328594 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content66% 
IMG OID639702675 
Producthypothetical protein 
Protein accessionYP_846028 
Protein GI116749341 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.336096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000890078 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACGCATG CACTGACGAT CGAGCCCATC GGAGTGATTC GAAGCCCCCT CCGGAGTGCC 
GCCGAAGCAC CCCGGCAGGG TCGGGAAGCC CGGATCGAAG GGGTCCTGGA AATCGAGGAA
CGATACCGGG ACGCCTGCGT CGGGCTCAAA CCCGGCCAGA ACATCGTCAT CCTCTACTGG
ATGCACCTGG GGGAGCGCGA CCGGCTCCAG GTTCACCCCC GGGGCGACCG CTCCCGACCG
CTTCGGGGAG TTTTTTCCAC CCGCAGCCCG CATCGGCCCA ACCCGATCGC CATCGAAAAC
GTCGAAATCC TGGCCGTCGA AGGAACGAAC ATCGCCGTCC GGGGCCTGGA CGCCTTCGAC
GGCACGCCGC TCCTGGACGT CAAGTGCGAG TACTGA
 
Protein sequence
MTHALTIEPI GVIRSPLRSA AEAPRQGREA RIEGVLEIEE RYRDACVGLK PGQNIVILYW 
MHLGERDRLQ VHPRGDRSRP LRGVFSTRSP HRPNPIAIEN VEILAVEGTN IAVRGLDAFD
GTPLLDVKCE Y