Gene Sfum_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1848 
Symbol 
ID4459824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2256605 
End bp2258092 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content64% 
IMG OID639702615 
Productankyrin 
Protein accessionYP_845968 
Protein GI116749281 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGT CGTCCGATAC GACTCGGAGT GTCGCGGAGC AGTGGTTTCG CGCTCTGCGG 
TCGGGCCATG GAGAGGAAGC CCTGGGTTGC CTCGATAAGG ATGTCGTATG GATCAATAAC
CCGCCCGAAG CGGGTCTCAG CGACATCATC CCCTGGCTGG GGGAATACCG TGGAATCGAG
GCGGTTCGGA AAACATTCGC TGTCTGGGCC GAAAGGGCGG AAGTCCGGAG TTTCGAGCTG
CGCAAACTCG TCATCGACGG TGACGAGGCT TTGGGAGTCG TGCACGAGGT CGCGGAAGTC
AAGGCCACGG CGTTGTGCTA CGACATCGAA TTCATTCAGC GGTTCCGGGT GGGCGACAGC
AAGATAGTCT TCTGGACGTC CTACTGGGAC ACCGTCAAGG GGATCGTGCC GTTTCGCGGG
GATCTGCGCG CGCGGCTCAT CGCGGCGGCG GAAAAAGGCG ATGAGAGGGA GGCCTTGAAC
CTCCTGCCGT TCGGCGCGGA TCCCGGCGTC CGCGACGAGA GGAGTGGGTT GACCGCGTTG
ATGATTGCCT CGGCGCGCGG GCATGCCGGC CTCGTCCGGA TGTTGATCCG GTTCGGAGCG
GACCCGAACG CGGTGGATCG GCGCGCGGGC GCCTCCGCTT TGCACAAGGC CTGCCAGGGG
GGGCACCTCG AGGCCGTGAA AGCGCTCATC GAAGCCGGCG CCCGGATCGA CCTGCAGGCG
GCGAGCACGG GGCACACGCC TCTGTTCGAG GCAATCTGGT TCAAGTCGGA CGCGATTGTG
GACCTCCTCC TCAAGCACGA CGCCCGGATC GAGGTGCTCA CCCATTACGG ATTCACCATC
GATCGGCATA TCGAGTACGC CCTCAACGTG AACAAGGGGG AGGCCGGGCT TGCGGCTCTC
AACAGGATCA AGGAAATGGT CCGGGAGAGG CGCGCGTCCG ACGATTCCAG GCAGTGCGCG
GGCGGCGTCA ATCAGGCCGT TCTGGAAGGG AACCTCGAAG GGGTGCGAAC CGCCCTCGCC
AGGGGCGGCG ACCTGGAGGA GCGGTTTCCC ATCGTCGGCA AGCTCTGGGA CGGTCACACG
CCATTGCTCA TTGCATCGCT CCGGGGGCAT GTCGACATCG TGCGGGAACT CATCGAGCGC
GGCGCCGACG TGAACGCGAT CGAGCCGGTG TTCGGCGCGG TTCCGCTGCA CAAGGCGACT
TACAACGGGC ACACTGAAAT CACGCGCCTG CTCGTGAAGG CAAAAGGCGT CAACCTGGAC
TACCAGGGAC CGGCGAACGG CTACACGCCC CTGCACGACG CTTTGTGGCA CGCCTACCCG
GATAGCGCTC AACCGCTCAT CGATGCCGGC GCCCGCCTGG ACATCGTTGC CTACGACGGG
AAATTGCCGG TCGATATCGC CGTCGAGGAA CTCGGGCCGG AACATCCCAT TGTCGGTCAA
CTCAAAGAAC GGGCGTCGGG AACAAAAGCG AAGCAACCCG TCGGGTGA
 
Protein sequence
MTVSSDTTRS VAEQWFRALR SGHGEEALGC LDKDVVWINN PPEAGLSDII PWLGEYRGIE 
AVRKTFAVWA ERAEVRSFEL RKLVIDGDEA LGVVHEVAEV KATALCYDIE FIQRFRVGDS
KIVFWTSYWD TVKGIVPFRG DLRARLIAAA EKGDEREALN LLPFGADPGV RDERSGLTAL
MIASARGHAG LVRMLIRFGA DPNAVDRRAG ASALHKACQG GHLEAVKALI EAGARIDLQA
ASTGHTPLFE AIWFKSDAIV DLLLKHDARI EVLTHYGFTI DRHIEYALNV NKGEAGLAAL
NRIKEMVRER RASDDSRQCA GGVNQAVLEG NLEGVRTALA RGGDLEERFP IVGKLWDGHT
PLLIASLRGH VDIVRELIER GADVNAIEPV FGAVPLHKAT YNGHTEITRL LVKAKGVNLD
YQGPANGYTP LHDALWHAYP DSAQPLIDAG ARLDIVAYDG KLPVDIAVEE LGPEHPIVGQ
LKERASGTKA KQPVG