Gene Sfum_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1811 
Symbol 
ID4459890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2210677 
End bp2211561 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID639702578 
Productglycosyl transferase family protein 
Protein accessionYP_845931 
Protein GI116749244 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0703738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.241248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAG CCTGCCGGCA GACAGTCTCG GTGATCGTTC CCACTTACAA CCGCAGAGCG 
TTCGTGAAGG AGGCGGTGGC TTCGGTGCTG GCCCAGGAGG GCGTTTTTCC GGAGATCATC
GTGGTTGACG ACGGCTCCAG TGACGGAACG GATCGCGCCC TCGAAGTTTT CGGCGAGCGG
ATCCGCCGCC TGCGGCGCGC TCACGGAGGG GCCAGCGCCG CGCGCAACAC CGGGATTCGC
ATCGCAGCCG GGGAATGGCT GGCATTTCTG GATTCGGACG ATTTGTGGCT GCCTTCCAAG
CTGCGCCGAC AACTTGACTT CCTGACCGCT CACCCGGAAT TCCTCGTCTG TCAGACCGAG
GAAATCTGGC TCAGGAACGG GGTGCGCATC AACCCGCGCA AATATCATCG GAAGCCGCGC
GGCCATTGCT TCGAACGGCT GCTTGACCGC TGCCTCGTGA GCCCCTCGGC AGTCATGATC
CACCGGGACG TTTTCGACTC GGTGGGCTTG TTCGACGAGA ATCTGCCCGC TTGCGAGGAT
TACGATCTCT GGTTGAGGAT CGGCTGCACG TATGCGCTCG GCCTGGTCGA GGAGCAACTG
GTGGTGAAAC GGGGAGGGCA TCCGGACCAA CTGTCGGCGA CCGTTCCGGC GCTCGATCGC
TACCGTATTC GGGCTCTTGC CAATCTGCTG CGCAGCGGCC GCCTCGACGA TTCCCAGGCT
GATGCGGCAT TCCGGGCGCT GAAGGTCAAA AGCCGGATCT TCGGCGAAGG TTGCGCCAGG
AGAGGCAAAG CCGAAGAAGC CGAAAAGATG CTGGGTCTTC CTGACGCCAT CGCCGGGGAA
CTCGGGCTGC CGATTTCTCC GGAAACAGGG GAGCTTCCCG GTTGA
 
Protein sequence
MTTACRQTVS VIVPTYNRRA FVKEAVASVL AQEGVFPEII VVDDGSSDGT DRALEVFGER 
IRRLRRAHGG ASAARNTGIR IAAGEWLAFL DSDDLWLPSK LRRQLDFLTA HPEFLVCQTE
EIWLRNGVRI NPRKYHRKPR GHCFERLLDR CLVSPSAVMI HRDVFDSVGL FDENLPACED
YDLWLRIGCT YALGLVEEQL VVKRGGHPDQ LSATVPALDR YRIRALANLL RSGRLDDSQA
DAAFRALKVK SRIFGEGCAR RGKAEEAEKM LGLPDAIAGE LGLPISPETG ELPG