| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1806 |
|---|
| Symbol | |
|---|
| ID | 4459884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2204292 |
|---|
| End bp | 2204861 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639702573 |
|---|
| Product | heterodisulfide reductase, C subunit |
|---|
| Protein accession | YP_845926 |
|---|
| Protein GI | 116749239 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1150] Heterodisulfide reductase, subunit C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.577988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGA CCGGTTTGAG TCCCGATTTT GGTTTTCTGG AGAGAGCGGA AGCCGCCGGG
CCGTTTAACG CTGCGGAGTG CTTCCAGTGC CGCAAATGCA CCAATGGCTG TCCAGCCACC
TTCGCCATGG ACCTCTATCC GGATCAGGTG ATTCGCCTGG CCATTCTCGG CCGGAAGGAG
GAAGTCCTGC ATTCGAAGAC GATTTGGGTT TGCGCGTCCT GTGAGACCTG CAGCACGCGC
TGTCCCAACG GGGTTCGGAT TGCGGAGTTG ATGGACTACT TCAAGGAACT TGCGGTCCGG
CTTGGAATTC CGTCGCCCGA GCCCGCGGTG ACGGCGCTTC ACCAGACGTT TCTGGAGAAT
GTGCGCTACA CCGGCAGGGT ATTCGAAGGG GCGCTGCTGC CCGTGTTTCT GCTCCGGAGC
GGGCAGCTCG GCAGCAAACT GGAGAAAGGC ACCTGGCGTG ACGAGGTGAA GCTGGGCTGG
CAGATGTTCC GCAAGGGACG CCTGGCTCTC GTGCCCAAGT TTATCCAGGG GAAAGGTGAG
ATCAGCTCGA TTCTTCGCCC ATCCAAGTAG
|
|---|
| Protein sequence | MQQTGLSPDF GFLERAEAAG PFNAAECFQC RKCTNGCPAT FAMDLYPDQV IRLAILGRKE
EVLHSKTIWV CASCETCSTR CPNGVRIAEL MDYFKELAVR LGIPSPEPAV TALHQTFLEN
VRYTGRVFEG ALLPVFLLRS GQLGSKLEKG TWRDEVKLGW QMFRKGRLAL VPKFIQGKGE
ISSILRPSK
|
|---|
| |