Gene Sfum_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1801 
Symbol 
ID4459879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2198588 
End bp2199706 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content59% 
IMG OID639702568 
Producthypothetical protein 
Protein accessionYP_845921 
Protein GI116749234 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.606792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CCAAGGAACA AATCGATTAT TGCATGGAAT GTGGCGTCTG CACGGGAAGT 
TGTCCGATAA GCAGAGTGAT TCCCAGTTTT TCTCCACGGC AGATGATCAA GAGGGCACTC
ATGGACCGGG ACGAAACGGT GGTGCAGAGC CGTGAATTGT GGGCCTGTCT CACGTGCGCC
CGGTGCAGTA CGCGCTGTCC GGTGCAGATT GATTTCCCGG AATTCGCCCG CGGCTTGCGC
GAACGGGCCA GGGGAGAGGG GAATCTGCCG CAGTTGAGCC ATCATGGAAC GCTCCAGGCG
ATCTCGGCGC TGCAGACGCG AAAGGTGAAA CAGAACCGCA CCGAATGGGC GGAGGCGGCC
GGGAAGTTCG CTGCCCAGGG CGATACCTTC CTTTTCGTGG GCTGCGCGCC TTTTTTCGAT
GCCGCCGTCA AGTACGGAGA CACGTCTCTC GATCCTGCCA GGAGTGTTCT GAGGTTGCTC
AACCGGATGG GGATCGAGCC GGTGATCAGC AACGATGAGC GGTGTTGCGG TCATGACGCG
CTCTGGAGCG GCGACGAAGA TACTTTTCTC AAGCTGATGG GGATGAACCT CGAGGTCATC
AAGGGATCGG GTGCGAAGAG GGTGCTGTTC AGCTGCCCGG AGGGGTATGC GACCTTCAAG
TATCAGGCTC CGAAGTATTT TGGCGACCTG CCCTTCGAGG TCCTTCACGC GACGGAGTTT
TTCGCGAAGG AGATTCCCGG ATCGGGCCTC CAGTTCAAGC CGGTGGAGAA CGGCGACGGC
GTGGTCACCT ACCAGGATCC GTGCCGCCTC GGGCGGAAAG CGGGGATTTA TGAACCGCCC
AGGGATCTGG TGAAGCTGGT TCCGGGGGTG AAGCTCGAAG AGATGGGCCT GAACCGTGAA
AACGCGGCAT GTTGCGGCAC CAGCGCGTGG ATGGAATGTT CGAATTGCTC GAAGACGCTG
CAGATCGAGC GTTTGCAGGA AGCGCTGGAA ACCGGGGCGA AGACCCTGAT CACGGCCTGC
CCCAAGTGCC GGATCCATCT GACGTGCGCT CAAAGCAACA CGGACATCAA GATGGACATA
GCCGATCTGT ACACCTTCGT CTTGAACCGT GTCGAATGA
 
Protein sequence
MKITKEQIDY CMECGVCTGS CPISRVIPSF SPRQMIKRAL MDRDETVVQS RELWACLTCA 
RCSTRCPVQI DFPEFARGLR ERARGEGNLP QLSHHGTLQA ISALQTRKVK QNRTEWAEAA
GKFAAQGDTF LFVGCAPFFD AAVKYGDTSL DPARSVLRLL NRMGIEPVIS NDERCCGHDA
LWSGDEDTFL KLMGMNLEVI KGSGAKRVLF SCPEGYATFK YQAPKYFGDL PFEVLHATEF
FAKEIPGSGL QFKPVENGDG VVTYQDPCRL GRKAGIYEPP RDLVKLVPGV KLEEMGLNRE
NAACCGTSAW MECSNCSKTL QIERLQEALE TGAKTLITAC PKCRIHLTCA QSNTDIKMDI
ADLYTFVLNR VE