| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1785 |
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| Symbol | |
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| ID | 4459897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2180341 |
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| End bp | 2181444 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639702554 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_845907 |
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| Protein GI | 116749220 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATATCG CATACTATGC ACGGATGATG AGCTCATTCA TAGTGGTCTT GGGGGTCCTG
ATATTCGTTC ATGAGCTGGG ACATTTTCTG GTGGCCAAAT GGATGCACGT CACGGTTTTG
AGATTCTCCC TCGGGTTCGG GCCCAAACTT TGGGGATTCA CCCGGGGAGA TACCGAATAC
CGGATTTCCT GGATCCCTCT GGGCGGCTAC GTCAAAATGC TGGGCGAGGA TTCCGAGGAA
GACGTCACCC CGGAACAGAT GGAGCGAAGC TTTTCGTCCC AGCGTGTGGG CAAGCGCATG
GCTATTGTAA TGGCGGGGCC TCTTTCCAAC TTTGTCCTTG CCATCGTCAT ATTCACCCTT
CTCTTCGCGT TCTCGGGAAT CCGCGAAATC ACCACGGACA TCGCTTCGGT CACCCAGGGC
TCACCCGCCG AAAAAGCCGG GTTGAAAGCC GGAGACAAAG TGATCGCCAT TGACGGAAAA
CCGATCTCCA CGTGGTATGA ATTGTCGGAA ACGGTTGAAG CACGCGGAGA GCATCCCCTG
CTGATACGGA TCCAGCGTGG AACGGAGACC CTGGACGTCG CCATTACTCC CTACATGGGC
GAAAAGGAAA GCGAGCTCAA GGAAAAGATC AAGACGCCGC TCATCGGCGT CGTGGCCTCA
TCCAACTATT TCATCAAGAA AATCAACCCA CTGGAGGCTG GATACTACAG CCTCCTTCAG
ACTTGGCACC TCACCAAGTT CTCCATCACG GTCGTGATCA AGCTGATTCA GCGCGCCCTG
CCTTTCAACG TTCTGGGCGG CCCGATCCTG ATTGCCCAGA TGGCGGGGCA GCAGGCCGAG
AAAGGGTTGC TGGAGCTCAT CAACTTCATC GCCCTGATCA GCGTCAACCT CGCGGTGCTG
AATCTGCTGC CCATCCCCAT ACTGGACGGG GGGCATATCA TGTTTTTTCT CGTGGAGGCG
GTCCTCGGGC GTCCCCTGGG TGTGAAGAAG ATCGAGATGG CGCAGAAGGT CGGAATGCTT
CTGCTGCTGG TTCTGATGGC CTTCGTGTTT TACAATGACA TCATGAGGCT GCTTCCGGGG
CAAAAACCCC AACTGTCACC GTGA
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| Protein sequence | MDIAYYARMM SSFIVVLGVL IFVHELGHFL VAKWMHVTVL RFSLGFGPKL WGFTRGDTEY
RISWIPLGGY VKMLGEDSEE DVTPEQMERS FSSQRVGKRM AIVMAGPLSN FVLAIVIFTL
LFAFSGIREI TTDIASVTQG SPAEKAGLKA GDKVIAIDGK PISTWYELSE TVEARGEHPL
LIRIQRGTET LDVAITPYMG EKESELKEKI KTPLIGVVAS SNYFIKKINP LEAGYYSLLQ
TWHLTKFSIT VVIKLIQRAL PFNVLGGPIL IAQMAGQQAE KGLLELINFI ALISVNLAVL
NLLPIPILDG GHIMFFLVEA VLGRPLGVKK IEMAQKVGML LLLVLMAFVF YNDIMRLLPG
QKPQLSP
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