| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1784 |
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| Symbol | |
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| ID | 4459896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2179092 |
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| End bp | 2180264 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702553 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_845906 |
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| Protein GI | 116749219 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTCAA GGACGATCAG CATTCTGGGG AGCACCGGTT CCATCGGCGA AAGCACCCTT
GAGGTTGTAC GGCAGTTTCC GGATCGATTC CGCGTCATCG CGCTCGGTGC GGGCCGGAAC
ATCAAGCTGC TGCGAGAGCA GATCAGAGCC TTCAGACCCC TGTCGGTTTC CGTTCTGGAT
TCGAACCTCG CCGACGAGCT CGATCGGTCC TTGAAAGGCG ACGCCTATCG CCCGGAAATC
CTCTTCGGTT CCGACGGCTA CGACCGAGTG GCCGCGCATC CGGAGGCGGG AACGCTCGTT
TCCGCGATGG TGGGCGCGGC AGGGCTCCTG CCGACCCTGA CCGCGATCAG GGCGGGCAAG
CGGTTGGCGC TCGCCAACAA GGAGACCCTC GTGGTGGCTG GAGAGATCGT GATGGCGCTT
GCCGCCGAGC ACGAGGTCGA GATCCTGCCC GTCGACAGCG AGCACAGCGC CATTTTTCAA
TCGTTGCAGG GCAACCACCG CGACGCGCTG AAGCGCATTC TCCTCACGGC CTCCGGAGGC
CCTTTCCTCA ACAAGACGCG TGAAGAGCTG GCTATGGTAA CGCCCCAGGC GGCGCTGTGT
CACCCCAACT GGTCCATGGG GCGCAAAATC ACCATCGATT CCGCAACCCT CATGAACAAG
GGGTTGGAGG TCATCGAAGC ACGGTGGCTG TTCGGAGTGC CGGTGGACCG GATCGCGGTG
CACGTGCACC CCGAGAGCAT CGTCCACTCC ATGGTGGAAT ACGTGGACGG CTCGGTAATC
GCGCAGATGG GCATCCCCGA CATGAAGATT CCCATTGCCT ACGCGCTGAC GTATCCCGAA
CGACTGCCCG TGCGGAGTCC GTCCCTCGAT CTGTTCCGGC TTCAGAAACT GTCTTTCTAT
CCTCCGGACG AGGAACGCTT CCCATGTCTT CGCCTGGCTT TTGATGCCTG TCGGAAGGGT
TCGACGTATC CGGCCGTTCT CAACGCCGCC AACGAGGTAG CGGTGGGCGC CTTCCTGGAT
GAGAAGATCG CCTTTCCAGA TATTCCCGGG GTGATCGAAA CAGCCATGGG CAAGCACAAA
GCACCGGCAA AGCCGGACCT CGACGCCGTC ATCGCAGCGG ACCGGTGGGC GAGGGTGGAG
ACCGAGCGGC TGATCGACGA TATAAGACGC TGA
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| Protein sequence | MGSRTISILG STGSIGESTL EVVRQFPDRF RVIALGAGRN IKLLREQIRA FRPLSVSVLD
SNLADELDRS LKGDAYRPEI LFGSDGYDRV AAHPEAGTLV SAMVGAAGLL PTLTAIRAGK
RLALANKETL VVAGEIVMAL AAEHEVEILP VDSEHSAIFQ SLQGNHRDAL KRILLTASGG
PFLNKTREEL AMVTPQAALC HPNWSMGRKI TIDSATLMNK GLEVIEARWL FGVPVDRIAV
HVHPESIVHS MVEYVDGSVI AQMGIPDMKI PIAYALTYPE RLPVRSPSLD LFRLQKLSFY
PPDEERFPCL RLAFDACRKG STYPAVLNAA NEVAVGAFLD EKIAFPDIPG VIETAMGKHK
APAKPDLDAV IAADRWARVE TERLIDDIRR
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