Gene Sfum_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1778 
Symbol 
ID4459925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2173828 
End bp2174652 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content58% 
IMG OID639702547 
Productribosomal protein S2 
Protein accessionYP_845900 
Protein GI116749213 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTGA TCAGTATGAA GCAGTTGCTG GAAGCCGGGG TTCATTTCGG TCATCAGACC 
CGTCGATGGA ACCCCAAGAT GAAGACTTAC ATTTTCGGCG CGCGCAACGG TATTTATATC
ATCGATCTCC AGCGCACGGT CCGCCTCTTT CACACCGCCT ACCAGTTCGT GACCCAGACC
GTTGGCTCCG GAGAACACGT TCTGTTTGTC GGCACCAAGC AGCAGGCGCG CGACACCATT
GCGGAAGAAG CGCAGCGTTG CGGCATGTAC TATATCAACC AGCGTTGGCT CGGCGGGATG
CTCACCAATT TCAAGACCAT CAAGCTGAGG GTTGACCGAC TCAAGGAACT GGACGCCATG
GTCGAGGACG GGAGCATCAA TCGCTTTCCC AAGAAGGAAA TTCTGCAACT TATGGGCGAG
CGGGAGAAGC TCGAGAAGAA CCTCGGCGGC ATCAAGAATA TGGCCCGGCT GCCCGGCGCT
CTTTATGTCG TGGATACGCA ACGTGAGAAT ATCGCGGTCC TGGAGGCCAA CCGGCTGGGG
ATCCCGGTGG TTGCCATCGT GGACACCAAC TGCGATCCCG ACCTCATCAA TTACCCGATC
CCCGGAAACG ACGACGCAAT CCGGGCTATT CGGCTGATCA CCTCCAAGGT GGCCGATGCC
TGCGCGGAAG GACGCCGGCG CCTCGAGGAA ACGGAGCAGG CCGACCACGA CAAGGAATTC
ACGGCCCTGG AGGAGGTCCC GGCCGGGCAG ATTCTCAAGG ATGAGGCGAG CGGACCGATT
GTGGAAATCG TCAATCCGGT GGCTGAGGCG GAAGAAGAGC AGTAG
 
Protein sequence
MAVISMKQLL EAGVHFGHQT RRWNPKMKTY IFGARNGIYI IDLQRTVRLF HTAYQFVTQT 
VGSGEHVLFV GTKQQARDTI AEEAQRCGMY YINQRWLGGM LTNFKTIKLR VDRLKELDAM
VEDGSINRFP KKEILQLMGE REKLEKNLGG IKNMARLPGA LYVVDTQREN IAVLEANRLG
IPVVAIVDTN CDPDLINYPI PGNDDAIRAI RLITSKVADA CAEGRRRLEE TEQADHDKEF
TALEEVPAGQ ILKDEASGPI VEIVNPVAEA EEEQ