| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1770 |
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| Symbol | trpA |
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| ID | 4459917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2165064 |
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| End bp | 2165858 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639702539 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_845892 |
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| Protein GI | 116749205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.86943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGGA TAGACGAGAA ATTCGAACAG TTGCGAAAAC GAAACGAAAA GGCCCTGGTG
GGCTTCGTGA CCGCCGGTGA TCCGGACCCC GGGCGGTCTC TGGAAATCAT CCGAACCATG
TGCAGGTCGG GCGTGGACAT CCTGGAGCTC GGGATTCCCT TTTCCGATCC CACCGCCGAC
GGCCCGGTCA TCCAGAGATC TTCGACGCGG GCACTGAAGG CCGGGATGAA CCTGTCAAAA
GCCTTTGAGA TGATTCGGGA ACTGCGCGGA ACCTGCGACG TTCCCATCGT GGCCTTCAGT
TACTACAACC CCATCCTGGC CTATGGAGGC GCCAAATTTT ACCGTGACGC CCTCGACAGC
GGAGCCGATG GAGTGCTCAT TGTCGACCTG CCGCCTGAGG AATCGGACGA GCTCACCCGC
CAATGGCCCG ATCGCGACCT GGCCTTGATC CGGTTGGTCG CTCCCACCAC TCCGCCGGAC
CGGATGAGCG CCATCGCGCA AAGCGCCTCA GGCTTCATCT ACCTGGTTTC CATGACCGGC
GTGACCGGAG GCGGTGAGCC GGACCTGACG GAGCTCTCTT TTCTGACGAG CGAGCTCCGT
TCCAGGTGCG ACGGCATTCC GGTGTGCGTC GGGTTCGGCA TTTCGTTGCC CGAGCATGCT
CGGGCCGTGA GTCCGCTGGC CGATGGCGTC GTGGTGGGCA CTGCGTTTGA GCGCATCATC
GAGGCGCACC AAAACGACTC GGCCGTGGCA TCGAAGGTCG GGGAGGCTGT GGGCGCACTC
AAGGCTGCTC TCTGA
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| Protein sequence | MNRIDEKFEQ LRKRNEKALV GFVTAGDPDP GRSLEIIRTM CRSGVDILEL GIPFSDPTAD
GPVIQRSSTR ALKAGMNLSK AFEMIRELRG TCDVPIVAFS YYNPILAYGG AKFYRDALDS
GADGVLIVDL PPEESDELTR QWPDRDLALI RLVAPTTPPD RMSAIAQSAS GFIYLVSMTG
VTGGGEPDLT ELSFLTSELR SRCDGIPVCV GFGISLPEHA RAVSPLADGV VVGTAFERII
EAHQNDSAVA SKVGEAVGAL KAAL
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